Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3243 ATGGCTTCCTCAGATGTTGAGTACCGGTGCTTCGTTGGTGGTCTAGCATGGGCCACTGACAGCGATGCCCTAGAGAAAGCTTTCTCTCAATACGGTGAAATCGTCGACTCGAAGATCATTAACGATCGTGAGACTGGAAGGTCAAGAGGTTTTGGATTTGTGACCTTTGCCACGGAGCAATCCATGAGAGATGCGATCGAAGGGATGAACGGTCAGGACATGGATGGACGTAACATCACAGTAAACGAAGCTCAGAGCCGTGGTAGCGGTGGAGGCGGCCGTGGTGGTGGCGGTGGATATGGAGGTGGACGTGGTGGTGGTGGATATGGTGGAGGTGGAGGCTATGGTGGCCGTCGTGAAGGTGGAGGAGGAGGATACGGTAGTGGAGGAGGAGGATATGGTGGTGGTGGTTATGGCGGAAGCCGGGATCGTGGGTATGGAGGAAGTGGTGGAGGAGGCGGTTATTCTCGTGGAGGAGGCGGTGGCGGTGGAAACTGGAGGGAGTAG 507 0.5582 MASSDVEYRCFVGGLAWATDSDALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFATEQSMRDAIEGMNGQDMDGRNITVNEAQSRGSGGGGRGGGGGYGGGRGGGGYGGGGGYGGRREGGGGGYGSGGGGYGGGGYGGSRDRGYGGSGGGGGYSRGGGGGGGNWRE* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3243 168 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Psa7g3243 168 PANTHER GEO13361P1-RELATED 1 168 - -
Psa7g3243 168 SUPERFAMILY RNA-binding domain, RBD 8 116 IPR035979 GO:0003676
Psa7g3243 168 PANTHER GLYCINE-RICH RNA-BINDING, ABSCISIC ACID-INDUCIBLE PROTEIN 1 168 - -
Psa7g3243 168 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Psa7g3243 168 Gene3D - 2 115 IPR012677 -
Psa7g3243 168 SMART rrm1_1 9 82 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3243 Psa-Chr7 243577570 243580306 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3243 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 35.443 6.28e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3243 - K13195 ccaj:109800369 160.999