Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3237 ATGTTAAATTGCATTCACTGGTTAGGAAGTATATATACAATATTTCTTGGGTTCTCAACCACTACAAGTCTTTTGCATCCTGAACTATCATCCTTCAAATATTTTTTTCTTAACCAATCCTCTAACCATAAAAAAACAATGGGTTTCCGCATAACAAGAATTATCAAAAAAGCATCATTTTCCAGAACCCAAGGATCTACCAAAGGATTTGAAGTTCCTAAAGGCTATCTTGCTCTCTATGTTGGAGATAAAATGAGGCGGTTTGTGATTCCAATATCATACTTGAACCAACCATTATTTCAAGAATTATTAAATGAAGCAGAACAAGAATTCGGATATGATCATACTATGGGCGGTCTTACAATCCCATGCAGTGAGGATGAATTCTTAAACCTCACTTCTCGCTTGAATTGA 414 0.3478 MLNCIHWLGSIYTIFLGFSTTTSLLHPELSSFKYFFLNQSSNHKKTMGFRITRIIKKASFSRTQGSTKGFEVPKGYLALYVGDKMRRFVIPISYLNQPLFQELLNEAEQEFGYDHTMGGLTIPCSEDEFLNLTSRLN* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3237 137 Pfam Auxin responsive protein 57 135 IPR003676 GO:0009733
Psa7g3237 137 PANTHER AUXIN-INDUCED PROTEIN 10A5 47 137 - -
Psa7g3237 137 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 47 137 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3237 Psa-Chr7 242736507 242737848 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3237 64 129 Calmodulin-binding Proteins AT3G43120 51.515 8.07e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3237 K14488 - gmx:100786095 151.754