Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3230 ATGGCTTCATCAAGTGGAACATCATCAGGTTCGGGTTCAGGTTCAGGTTCAGGTTCATCTCTGCTACAAAACTCAGGTTCGGAAGAAGATTTACAGGCTTTGATGGATCAGAGAAAGAGGAAGAGGATGATATCGAACCGCGAATCGGCGAGACGGTCTCGGATGAGGAAACAGAAGCACTTGGATGATCTTGTTTCTCAAGTGACAAAACTGAGGAAAGAGAATCAAGAAATGCTCACAAGTGTTAATATCACCACTCAACAATATTTGAGTGTTGAGGCTGAGAATTCTGTTTTGAGGGCTCAGATTGGTGAATTGAGCAACAGGTTAGAATCTTTGAATGAGATTGTTGGGGTTATGAATTCAAGCAATGGAGTTTTTGTTGAGCCAAACAATAGCTTCTTCTTCTTCAACCCTTTGAGTAATATGTCTTATATGAATCAGCCTATTATGGCTTCATCAGACATATTACAATATTGA 480 0.4021 MASSSGTSSGSGSGSGSGSSLLQNSGSEEDLQALMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVTKLRKENQEMLTSVNITTQQYLSVEAENSVLRAQIGELSNRLESLNEIVGVMNSSNGVFVEPNNSFFFFNPLSNMSYMNQPIMASSDILQY* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3230 159 Coils Coil 61 81 - -
Psa7g3230 159 Pfam bZIP transcription factor 38 83 IPR004827 GO:0003700|GO:0006355
Psa7g3230 159 SMART brlzneu 34 98 IPR004827 GO:0003700|GO:0006355
Psa7g3230 159 Coils Coil 96 116 - -
Psa7g3230 159 MobiDBLite consensus disorder prediction 32 61 - -
Psa7g3230 159 Gene3D - 36 92 - -
Psa7g3230 159 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 41 56 IPR004827 GO:0003700|GO:0006355
Psa7g3230 159 PANTHER BZIP TRANSCRIPTION FACTOR 1 157 - -
Psa7g3230 159 MobiDBLite consensus disorder prediction 1 31 - -
Psa7g3230 159 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 36 99 IPR004827 GO:0003700|GO:0006355
Psa7g3230 159 SUPERFAMILY Leucine zipper domain 38 90 IPR046347 GO:0003700|GO:0006355
Psa7g3230 159 CDD bZIP_plant_GBF1 39 89 IPR045314 GO:0003700|GO:0006355
Psa7g3230 159 MobiDBLite consensus disorder prediction 1 61 - -
Psa7g3230 159 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3230 Psa-Chr7 242063466 242065339 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3230 32 159 bZIP Transcription Factor Family AT4G34590 60.714 5.92e-49 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa7g3230 bZIP_1 3e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3230 K25786 - gmx:100101862 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3230 7 242063466 242065339 Psa7g3230 7 242063466 242065339 ECH