Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3203 ATGGCCCATTCATATCATCACATGGGCTTGACCACGATAGATGCAACAACAAAATGGCGTAATCTCGTAATTATCTTCAACTCCAGTGGCATTTCACTTTCACAAATTCCATATATACGTTCCACCTTCCACACTACCAAATTCCCATTACAACGAAACAAAACCCGCTCCGTTACTTTTTCCACACTCCACCTTTTTCTCTTTCACTTTTTCAATTTTCAAATGTCACCGTCACCGTCGACTACCACCGGAAAAATCAGTAAAATCCGCCGCATTGTGCGGCTCCGAGAAATGCTTCTCCGGTGGAGAAAGAAAGCTAGATTAGCAACCACCTACGATGTACCGGAAGGACACGTGGCGGTTTGCGTGGGTCCTACCATGAGGAGGTTCGTCGTTCGCGCTAGCTACTTGAATCACCCGATCTTCAAGAAGCTTCTGATGCAGGCGGAGGAAGAGTACGGATTCTGCAACCATGGACCGCTTGCCATACCGTGTGATGAGTTTGTGTTTGAAGAGCTTCTTCGGGTTATGGCCCGACCCGAGCCTAGATTATCGACGCTTGAGGATTTTCAGAGACGGTGCCACGTGGATGTGAGAAATAGTAGTGGTTTTGAGTTTGTAGGAGAATCGAGACCTTTGCTTCATGATGATCTAATTTGCTGA 663 0.4661 MAHSYHHMGLTTIDATTKWRNLVIIFNSSGISLSQIPYIRSTFHTTKFPLQRNKTRSVTFSTLHLFLFHFFNFQMSPSPSTTTGKISKIRRIVRLREMLLRWRKKARLATTYDVPEGHVAVCVGPTMRRFVVRASYLNHPIFKKLLMQAEEEYGFCNHGPLAIPCDEFVFEELLRVMARPEPRLSTLEDFQRRCHVDVRNSSGFEFVGESRPLLHDDLIC* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3203 220 PANTHER SMALL AUXIN-UP RNA-RELATED 84 216 - -
Psa7g3203 220 Pfam Auxin responsive protein 102 176 IPR003676 GO:0009733
Psa7g3203 220 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 84 216 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3203 Psa-Chr7 239115310 239117388 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3203 84 214 Calmodulin-binding Proteins AT4G34750 49.655 2.05e-41 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3203 K14488 - gmx:100795345 198.749