Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3160 ATGAAGGCAATAATACCCAAATCCAAACTTGTTGCGTCAAATTTAAGTTCACACTTCAACAAATCGCCGCCTCCCAAGTCGGAGGAGGGTTCGCTCCTCCTGATTCTCATCCACTTTTCTTCTTTCTCCAATTTAAGGCTAAAGCAATTCTTCAAGGAAGGTATGATGAAAGAAAATCCCAAGGGAAAATGTGGGTCATCTTCTCATAAATCCATGAAAGAAAAAGAGAAATACTTGGTGGATAAGATTCAAGGGATTTTCACCAATCTTCAGTCTGCCAGAAAGGAAAGCAGGGCTAATGACATTGTGATGTTTGAGGAGCAGATGCATCAGTTGCTTCGAGAGTGGAAGGCCGAACTCGAGTCTCCGGCTACTTCCTTAGCTGATGGGAGCCTTGGTTCGTTTACCGGGGATTTAGCCCAACTGTTGCAAGCAATTGAGGAGAAAGATGACGCAACAAGTCCATTAACAAACCCTGGGCCGTTGAAGACTGATGTCCATCAAAATAACATTAGTGATAACAATTATCCGTATTTTCAGGAGAAATCTTTTGATAATAACCAGCCACTAAATCATACTTTCGAAGGCTCTGCTTCAACTATATTCAACAATGCTTTAAATAGCTCAGACATGGTTCAGTTGGACTTTCATCCATTCGGTTTAAATGAAGAAATGAGTCACAACACTGTAGGTCACAACTCTGATTTGATTGGTCAGTTTGACTTGTATCAAAACCACAGCCTCGAGCACAACACAGAAATTAAAAACTCAGAGTCGGGTCAATTTAGTTTTGAAGAAGGCTTTGATTGTAGCCAATTTTTCGTAGATAATGACACCACACAATTTGGAGACAATCTTATACCTAACATTCTTCCAAATATCCGCCCTCCACCTTCTGCTTTTCTAGCCCCAAAATGTGCACTATGGGACTGTTTCAGACCTGCTCAAGGGTTAGAACGGTGCCAGGACTACTGTAGTACTAATCATGAGCTTTTAGCTAATAGCGAGGGTCTCCCTGGCATGACTCCCATTTTACGACCTGGTGGCATTGATGTAAAAGACGGTCCTTTGTTTGCTGCTGTTCTTGCAAAGACACTGGGAAAAGAAGTGGGCATACCTAAGTGCGAAGGCGCTGCTTCAACGAAAGCCCCTTGGAATGCTTCAGAGTTCTTTGACCTTTCTTTTCTTGAGGGTGAAACTATTAGGGAGTGGCTGTTCTTTGACAAGCCTAGAAGGGCGTTTGACACTGGAAATAGGAAACAGAGATCACTCCCCGATTACAGTGGGCGTGGTTGGCATGAATCAAGGAAGCAAGTGATGAAGGAACACGGGGGACACAAGAGATCCTATTACATGGATCCCCAGCCTCTAAGTTATCTCGAGTGGCATTTGTACGAGTACGAGATCAATAACCAGGATGGCTGTGCATTATACAGACTAGAATTAAAGCTTGTAGATAAAAAGAAAAGTCCTAAAGGAAAAGTTACTAAGGAATCTCTAAATGATTTACAAAACAAGATGGGAAAGCTAACCGCCGCCGTTCCGTCGCCAGACGATGGAAAATCGGTGAAGGGAAAATCTGAAGCCAAGTCTGAGAATATTGGCCTGCCTGAAAATTAA 1620 0.4272 MKAIIPKSKLVASNLSSHFNKSPPPKSEEGSLLLILIHFSSFSNLRLKQFFKEGMMKENPKGKCGSSSHKSMKEKEKYLVDKIQGIFTNLQSARKESRANDIVMFEEQMHQLLREWKAELESPATSLADGSLGSFTGDLAQLLQAIEEKDDATSPLTNPGPLKTDVHQNNISDNNYPYFQEKSFDNNQPLNHTFEGSASTIFNNALNSSDMVQLDFHPFGLNEEMSHNTVGHNSDLIGQFDLYQNHSLEHNTEIKNSESGQFSFEEGFDCSQFFVDNDTTQFGDNLIPNILPNIRPPPSAFLAPKCALWDCFRPAQGLERCQDYCSTNHELLANSEGLPGMTPILRPGGIDVKDGPLFAAVLAKTLGKEVGIPKCEGAASTKAPWNASEFFDLSFLEGETIREWLFFDKPRRAFDTGNRKQRSLPDYSGRGWHESRKQVMKEHGGHKRSYYMDPQPLSYLEWHLYEYEINNQDGCALYRLELKLVDKKKSPKGKVTKESLNDLQNKMGKLTAAVPSPDDGKSVKGKSEAKSENIGLPEN* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3160 539 MobiDBLite consensus disorder prediction 417 446 - -
Psa7g3160 539 MobiDBLite consensus disorder prediction 426 446 - -
Psa7g3160 539 PANTHER TRANSCRIPTION FACTOR VOZ1 56 533 IPR039277 GO:0006355|GO:0048578
Psa7g3160 539 MobiDBLite consensus disorder prediction 491 539 - -
Psa7g3160 539 PANTHER TRANSCRIPTION FACTOR VOZ2 56 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3160 Psa-Chr7 233500282 233504645 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3160 55 515 VOZ-9 Transcription Factor Family AT1G28520 51.398 3.95e-155 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Psa7g3160 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3160 - - mtr:MTR_4g079240 775.778