Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3142 ATGGGAATTCAGAGATATATGGTTGTCATTAAGTTTAGTTTTTGTGTTTTTTTAGTTTTCCATCTTGTAGCAGCTGTTAGCTTTATAGTAAAGAAGGAAACACCAGATGGCTTTGTTAGAGAACTATTTGATTCGGCATCTGGATTGTTCGACGAGCACACAGCAAAGGCATTATGGACCACATGCTGTGAAGATTTTATTCATTTAAAGGAAGAGGTTGGATATCGTGATTTATGCCACCCACTAGAATTCTATGCTAGTACCAATAAACTCAGTTCCACGATTCAACCTCTTTCACAAACAGAAATCCAAAAATTGCATGGTGCTTTCCATCCTCACGTTAGGGAAAACTTTCTTCATTGTTTGAGAAAAAATAATCTTCAATTACGTGTCTCAGGAGAAGAGGTTGATTCCAAGATATGGCATGTCACTAATACGGGATATCTGTTTTCCTCATCCAGTATTCTTAGAAGAAATCCGGGCCGTGTTTTGCTCCAGCACATATCAGAACCACCTAGTTCAGGCCCTGCAGCTGGATCACCTGAACCTAGTCTCACTCCACCACCTGAGCCCAGTCCGACTCCATCGCCTGGACCTAGTATATCTCCATCGCCTACTCCAGTGCCTCTACCTCCTCAACCTCCGTCTCCTCCTTCGTCACCAACCCCATTTTTTCCCAAGCTGACACCGCCAGAAGCTGAGGATATTTCTGCTCCTCCATCTCCTGACACGAACGGGGAGGATGATAAGTCAAGTAAAAAGAGAACAGTTGTTCTTTCTGTAGTAATAACTTTATCAGTGATATTTATAGCTGCAGCATTGTTCTTTTTATGCTTTCGTAAGAATGCCCGGCTTAGACGTAATGATGAGAGGCCCCTTCTCAGCTTGAGCATGAATGACTATTCTTTTGGTCCTTCCAATCACGCTTTTGGAAATTCGACAAAAGGGGAGAAACATGGGTTTCAGTCATCAAGTAATAATTTAGTAGATAACAAGAAGACCTCACTGCAAGAAAATCAATCAATAGGAGCTCTTGCTACTTCCGTATCACCATTTGAATTGAAACCTCCTTCCGGGAGAGGGGGAACTATCCATTCTGGAATGCCACCTTTAAGACCTCCTCCAGGCAGGATGAATCCTCTTCCGCCGGAGCCACCTTCATTTAGGCCATCTAGCAATAGTGCTGTTGCTGCGGCTGCTGCACCTCCTCCTCAACAGTCTAGTGTTGGCAGTGCTCGACCTCCTGCTGCTCCTTCACCACCACAATCAACACTAGCTGGTCCCACACCTGGTCCTCCTCGTCCTCCATTACCCCCTGGTCCGCCTGGTGCCAAACCCCGTCCTCCACCATCCCCAGCACCACCTGGTGCTAAACCCGGTCCTCCTCCCCCACCACCTCCAGCACCACTTGGTGCTAAACCCGGTTCTCGTCCACCTCCTCCTCCTCCTAAAAGCGGTGTAGCTCCTCCTCGACCACCAATTGGCCCGAAGGCTAGTGGATCCAAAGCTTCACTGAATGCTGAAGCAGCTGGAGCTGATAGTTCTAAAGCCAAACTAAAGCCATTTTTCTGGGACAAGGTTCAAGCTAATTCAGATCAATCAATGGTTTGGAATGAGATCAAATCTGGATCATTCCAGTTTAACGAAGAGATGATAGAGACACTTTTTGGTTATAATGCTGTAAATAAAAACAATGGTCAACGACAGAAGGAGTCCTCCTCCTCCCAAGACCCTTCACCCCAGTATATCCAGATCGTTGACAAAAAGAGAGCACAAAATTTATTAATTCTGTTGCGAGCATTGAATGTGACAATGGAAGAAGTTTGCGATGCACTCTATGAAGGAAACGAGCTACCGTCGGAATTTCTTCAAACCTTGTTGAAGATGGCACCGACATCAGACGAAGAACTTAAACTTCGAGTTTTTAGTGGTGATCTGTCTCAACTTGGGCCTGCTGACCGTTTCCTTAAAGCCTTGGTTGACATTCCCTTTGCTTTTAAGCGAATGGAGGCACTGCTTTTCATGGGAACATTTAAAGAGGAACTCACTACTACTAAGGAGTCTTTTGCAGTTTTAGAGGTTGCTTGTAAGGAACTAAGAAACAGCCGTCTGTTCCTCAAACTTCTTGAAGCTGTTCTAAAAACTGGAAATCGTATGAACGACGGAACATACCGTGGCGGTGCACAAGCGTTTAAACTTGATACACTTTTGAAATTATCTGATGTAAAAGGAACCGACGGCAAGACTACACTCTTACACTTTGTTGTTCAAGAGATTATCCGCTCCGAGGGCATAAAAGCTGCTCGAGCAGCGAAAGAGAGCCAGGGTTTGTCGGGTATTAAAACAGATGAACTTCTTGAGGATAAGGATAATGCGCGTGAAACAGAAGAAGACCACTACCGCGAACTTGGTCTTGAGATGGTTTCACATTTGAGCAGTGAGCTTGAGAATGTTAAAAGAGGATCTGTTCTAGATGCGGATAGCTTAACAGCAACTGCGGCCAAACTTGGTCACGGTCTCTTGAAAGCCAAAGACTTACTGAGCAAAAACCTGAAGAATGTGGAGGACGATAGAGGGTTTCGCGAGACAGTGGAAAGTTTTGTCCAGGATGCGGAGGCTGATGTTATGAAACTGCTTGAAGATGAGAAGAAAATCACGGCTCTGGTGAAGAGCACTGGCGATTACTTTCACGGGAATGCTGCAAAGGATGATGGCTTGCGATTGTTTGTAATAGTGAGAGACTTTTTAATAATGCTTGATAAGGTGTGCAAAGAGGTGAGAGACGCACAGAAGAAACCAGCAAAACCTCGAAAACAAGAAACTTCAAGGGGATTGTCTCCGCCTGATACGCGTCCATCACCTTCTGATTATCGTCAGCGGCTTTTTCCAGCTATAGCTGAAAGGAGGATAGATGACCTTAGTTCAGATGATGAGAGTCCATAG 2943 0.4499 MGIQRYMVVIKFSFCVFLVFHLVAAVSFIVKKETPDGFVRELFDSASGLFDEHTAKALWTTCCEDFIHLKEEVGYRDLCHPLEFYASTNKLSSTIQPLSQTEIQKLHGAFHPHVRENFLHCLRKNNLQLRVSGEEVDSKIWHVTNTGYLFSSSSILRRNPGRVLLQHISEPPSSGPAAGSPEPSLTPPPEPSPTPSPGPSISPSPTPVPLPPQPPSPPSSPTPFFPKLTPPEAEDISAPPSPDTNGEDDKSSKKRTVVLSVVITLSVIFIAAALFFLCFRKNARLRRNDERPLLSLSMNDYSFGPSNHAFGNSTKGEKHGFQSSSNNLVDNKKTSLQENQSIGALATSVSPFELKPPSGRGGTIHSGMPPLRPPPGRMNPLPPEPPSFRPSSNSAVAAAAAPPPQQSSVGSARPPAAPSPPQSTLAGPTPGPPRPPLPPGPPGAKPRPPPSPAPPGAKPGPPPPPPPAPLGAKPGSRPPPPPPKSGVAPPRPPIGPKASGSKASLNAEAAGADSSKAKLKPFFWDKVQANSDQSMVWNEIKSGSFQFNEEMIETLFGYNAVNKNNGQRQKESSSSQDPSPQYIQIVDKKRAQNLLILLRALNVTMEEVCDALYEGNELPSEFLQTLLKMAPTSDEELKLRVFSGDLSQLGPADRFLKALVDIPFAFKRMEALLFMGTFKEELTTTKESFAVLEVACKELRNSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIKAARAAKESQGLSGIKTDELLEDKDNARETEEDHYRELGLEMVSHLSSELENVKRGSVLDADSLTATAAKLGHGLLKAKDLLSKNLKNVEDDRGFRETVESFVQDAEADVMKLLEDEKKITALVKSTGDYFHGNAAKDDGLRLFVIVRDFLIMLDKVCKEVRDAQKKPAKPRKQETSRGLSPPDTRPSPSDYRQRLFPAIAERRIDDLSSDDESP* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3142 980 Pfam Formin Homology 2 Domain 514 919 IPR015425 -
Psa7g3142 980 ProSiteProfiles Formin homology-2 (FH2) domain profile. 509 945 IPR015425 -
Psa7g3142 980 PANTHER FORMIN-RELATED 1 978 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Psa7g3142 980 MobiDBLite consensus disorder prediction 386 515 - -
Psa7g3142 980 MobiDBLite consensus disorder prediction 176 237 - -
Psa7g3142 980 SMART it6_source 509 937 IPR015425 -
Psa7g3142 980 SUPERFAMILY Formin homology 2 domain (FH2 domain) 580 941 - -
Psa7g3142 980 MobiDBLite consensus disorder prediction 390 413 - -
Psa7g3142 980 MobiDBLite consensus disorder prediction 928 944 - -
Psa7g3142 980 MobiDBLite consensus disorder prediction 414 496 - -
Psa7g3142 980 MobiDBLite consensus disorder prediction 170 253 - -
Psa7g3142 980 PANTHER FORMIN-LIKE PROTEIN 1 978 - -
Psa7g3142 980 Gene3D Formin, FH2 domain 515 944 IPR042201 -
Psa7g3142 980 MobiDBLite consensus disorder prediction 928 961 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3142 Psa-Chr7 230092853 230098176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3142 476 926 FH2 protein (formin) Gene Family AT3G25500 47.403 4.54e-123 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3142 - - gmx:100793413 1077.77