Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3132 ATGCATGTGATGACATCAATAGAGAACTACAATAGTCGAACTGATGCGATAGACGTTCTTACTTCATCTCAAGACTGCTATGTCTCTAAGGAGGGTACTTCTACGAACTGGTCTTCACCACTTATGAGAGAATGTTATCTTACAAGAAACTTTGAAGAAAACAGCAACAGTGATGATGTTGGGGAAGGAAATGGTTCTGATTCTGGTGATGGTGTTGAAGAAAACAGTCACAAAATTAACCTAAATGAAGAGCCCAACCCTAATGAGAATAATACTGGACATTCTAAACTATGTGCGAGAGGTCATTGGAGACCTGCAGAAGATTCTAAGCTCAAAGAACTTGTTGCTCTATATGGTCCTCAGAACTGGAACCTCATTGCTGAAAAGCTACAAGGAAGATCAGGTAAGAGTTGTAGACTTAGATGGTTCAACCAGTATCTAGGTTCTTATTTGTCTTCTCGAAAATCACTTCTTCTCGAAGAAAGACTAATGCAAGCTCATAGGATTTATGGAAACAAATGGGCTATGATTGCAAGGCTTTTCCCTGGAAGAACCGATAACGCAGTTAAGAATCACTGGCATGTTATAATGGCTAGAAAGTACAGAGAACAATCAAGTGCTTACAGGAGAAGGAAGCTGAGTCAATCGATTTACAGAAGAATAGAAGATAACACAACAAGCTTTGTCTCAAGAGATATAGATCCAGTTTCTTCATCCTATTCTTCTTTCAACTTCCCAAATGCCTATAATATCACTACTTTTCCATATCCATCTATTCAGGCTGGTGTTGAGTGTGGCTTAAATGGTTCATCTTCCATGAATGGTGTCAAAGAAGCAATCTCAAGCAACAAACAGTCCCTTTCTCCTATTCATTTCTTTTCAGGAGCTAATAGTAATATGTATAATCAACCAATGGGTTTCTGCCATAATTATCCCCAATATATGATGCCAATGCAGCAACAACAACAAAGCAACAATCACAACAACAATAATTCTAACATTTATAGTTTCTCATCAAATTCAACCACAGCAGCGACAAGAGCACAAATATTGAACAGTGAAGTTTCACTATCATCGGTGGCAGCAGAAGAAAGAAATCAAGTTCTGATGAGTAATCCCCCTCCACCTTCAGATGCAACTCCATTTATTGATTTTCTTGGAGTAGGAGCCACATGA 1176 0.3852 MHVMTSIENYNSRTDAIDVLTSSQDCYVSKEGTSTNWSSPLMRECYLTRNFEENSNSDDVGEGNGSDSGDGVEENSHKINLNEEPNPNENNTGHSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLQGRSGKSCRLRWFNQYLGSYLSSRKSLLLEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKLSQSIYRRIEDNTTSFVSRDIDPVSSSYSSFNFPNAYNITTFPYPSIQAGVECGLNGSSSMNGVKEAISSNKQSLSPIHFFSGANSNMYNQPMGFCHNYPQYMMPMQQQQQSNNHNNNNSNIYSFSSNSTTAATRAQILNSEVSLSSVAAEERNQVLMSNPPPPSDATPFIDFLGVGAT* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3132 391 ProSiteProfiles Myb-like domain profile. 160 197 IPR001005 -
Psa7g3132 391 PANTHER MYB TRANSCRIPTION FACTOR 19 391 - -
Psa7g3132 391 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 150 IPR017930 -
Psa7g3132 391 SMART sant 153 199 IPR001005 -
Psa7g3132 391 SMART sant 99 148 IPR001005 -
Psa7g3132 391 ProSiteProfiles Myb-like domain profile. 100 146 IPR001005 -
Psa7g3132 391 CDD SANT 160 194 IPR001005 -
Psa7g3132 391 MobiDBLite consensus disorder prediction 53 75 - -
Psa7g3132 391 Gene3D - 100 147 - -
Psa7g3132 391 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 160 201 IPR017930 -
Psa7g3132 391 PANTHER MYB PROTEIN-RELATED 19 391 - -
Psa7g3132 391 CDD SANT 103 144 IPR001005 -
Psa7g3132 391 SUPERFAMILY Homeodomain-like 100 197 IPR009057 -
Psa7g3132 391 Pfam Myb-like DNA-binding domain 159 195 IPR001005 -
Psa7g3132 391 Pfam Myb-like DNA-binding domain 100 144 IPR001005 -
Psa7g3132 391 Gene3D - 160 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3132 Psa-Chr7 227886073 227888489 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3132 80 236 MYB Transcription Factor Family AT1G69560 66.265 4.43e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Psa7g3132 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3132 K09422 - gmx:100804537 313.153