Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3088 ATGTCTGCTCTACCTTTCTCAACAACCTGCAGGCATTCCAACCCACCTTTACATCCACATTTCAAATCAAGCTTCACAGGATTCGGTCAAAGAAACAATATTTGGCAGTTGTGTGTCATCACAAAGTCAAGCTCCAGTAGAGCTATAAGAAAGCTGCGTGTGAAGAATGTTGCCAGCGACAAAAAGAAGGAACTGAAAGAACCACTCACTGGACAAGGCACTTCAAATGAATTTGTACCAGATTCTACAGCTATAGCTTCAAGCATCAAATATCATGCTGAGTTCACCACATCTTTTTCACCGGAGAAGTTTGATCCCAATAAGGCTTTCTTTGCAACTGCAGAGAGTGTCCGTGATTCCCTCATCATAAATTGGAATGCAACATATGAGTATTATGAGCGGATTAATGTTAAACAAGCTTATTACATGTCTATGGAGTATCTACAGGGCAGGGCATTGTTAAATGCAGTTGGGAATTTACAACTCTCAGGTCCTTATGCTGAGGCCCTCAGAAAGCTTGGTTACAGTTTAGAAGATGTGGCTAATCAGGAGCCAGATGCTGCTCTTGGGAATGGAGGATTAGGCCGGCTTGCTTCTTGCTTCCTAGACTCCTTGGCGACGCTGAATTACCCTGCATGGGGATATGGACTTAGATACAAGTACGGTTTATTCAAACAGCTTATAACCAATGATGGTCAGGAGGAAGTTGCTGAAAATTGGCTTGAGATGGGGAATCCCTGGGAAATTCAGAGGAACGATGTTTCGTATCCAGTTAAATTCTATGGAGAAGTTATTTCAGGGCCAGATGGAAGTAAACAGTGGACTGGAGGAGAAAATATATCGGCTGTTGCTTATGATGTTCCAATACCTGGATACAAAACTAGAACCACCGTAAACTTGCGATTGTGGTCCACTAAAGTTTCAACTGAAGAATTCGATTTGCAAGCTTTCAATACTGGCGATCATGCCAAAGCATACGCTGCCATGAAGAACGCAGAGAAGATCTGTTACGTTCTATACCCTGGGGATGAATCAATCGAAGGAAAGACTCTACGGCTAAAGCAACAATATACATTATGCTCCGCATCTCTCCAGGATATTATTGCACGTTTTGAAAAGAGATCAGGAAGGACTGTAAATTGGGAGACCCTCCCAGATAAAGTGGTGGTACAAATGAACGATACTCACCCAACTCTTTGCATTCCCGAGCTGATTAGGATCCTGATAGATGTTAAGGGTTTAAGCTGGGAGAAAGCTTGGGATATTACTAAAAGAACGGTTGCTTACACAAACCACACAGTTCTACCAGAGGCACTAGAGAAGTGGAGTTTGACGCTTCTGCAGGATTTACTTCCTCGACATGTGGAAATAATAAGAAAGATAGATGAGGAGTTTATACATGAAATTATTTCTGAGTATGGGACTGGTGATCTTAACTTGCTGCAAGGAAAGCTCAGAAAGATGAGAATACTTGAAAATATTGAGTTGCCTGATTCGGTGGTTGTGCTTCTTAATAATACAATTCCCGCTGTTGATTATGTTGAGGAAATTGATGTTGATGATAATGATATAGAGGCAACAAACAAGAAAGATGAAGACGAAGAAGATGGTGATGAAGATGAAGCGGGGGAAGACCTTGTTGTAGAGAACAAAATAGAAATGACATTCAAAGTTGATCGAAAACTGCCGATGATGGTTCGCATGGCTAACCTATGTGTTGTTGGTGGATTTTCTGTGAATGGAGTAGCTGAGATTCACAGTGAGATTGTAAAAGAAGAAGTTTTTAATGAATTTTACGAGTTGTGGCCTGAGAAATTCCAGAATAAAACAAATGGGGTAACACCTAGAAGATGGATCCGTTTCTGTAATCCCGATCTTAGTAAAATCATAACCAAATGGATTGGAACAGAAGACTGGGTAACAGATCTTGAGAAATTGGCTATACTTCGCAAGTTTGCAGATAATGAAGAATTACAATTAGAGTGGATGGAATCAAAGAGAAGAAACAAGATTAAGGTTGCATCATTTATCAAAGAGAAAACGGGTTATGTTGTCAGTCCCAATGCAATGTTTGATGTACAGGTGAAACGTATCCATGAATACAAACGGCAATTACTGAATATCATGGGAATTGTTTATCGGTACAAGAAAATGAAAGAGTTGAGTGCTGAGGAAAGAAAACAAGTATTTGTTCCTCGGGTTTGTATTTTTGGTGGGAAAGCATTTGCGACATATGTTCAAGCCAAGAGGATTGTAAAATTCATCACAGATGTAGGAGCCACAGTTAACCATGATCCAGAGATCGGAGATCTTTTGAAGGTTGTATTTGTTCCCGATTACAATGTCAGTGTAGCTGAAATGCTAATTCCTGGCAGTGAACTGTCTCAGCACATTAGTACAGCTGGTATGGAGGCCAGTGGAACAAGCAACATGAAATTTGCAATGAATGGATGCGTACAAATTGGAACTCTCGATGGGGCTAACGTAGAAATAAGAGAAGAAGTTGGAGAAGACAACTTCTTTCTTTTTGGCGCACGAGCTCAAGAAATTGCAGGGTTAAGGAATGAAAGAGCAGAGGGAAAGTTTGTACCAGACCCGCGGTTTGAAGAAGTGAAGTCATATGTTAGAAGTGGTGTTTTTGGCAGTTATAACTACGACGATTTGATAGGATCTTTGGAAGGGAATGAAGGCTATGGCCGTGCCGATTATTTTCTTGTTGGCAAGGACTTCCCTAGCTACTTGGAGTGCCAAGAGGAAGTTGACAAGGCATACCGGGATCAGAAAAAATGGACAAGAATGTCAATATTGAACACAGCTGGTTCGTATAAATTCAGCAGTGACCGGACTATTCATGAATATGCTAGAGATATATGGAGAATTGAGCCAGTTGTATTGCCTTGA 2901 0.4085 MSALPFSTTCRHSNPPLHPHFKSSFTGFGQRNNIWQLCVITKSSSSRAIRKLRVKNVASDKKKELKEPLTGQGTSNEFVPDSTAIASSIKYHAEFTTSFSPEKFDPNKAFFATAESVRDSLIINWNATYEYYERINVKQAYYMSMEYLQGRALLNAVGNLQLSGPYAEALRKLGYSLEDVANQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQLITNDGQEEVAENWLEMGNPWEIQRNDVSYPVKFYGEVISGPDGSKQWTGGENISAVAYDVPIPGYKTRTTVNLRLWSTKVSTEEFDLQAFNTGDHAKAYAAMKNAEKICYVLYPGDESIEGKTLRLKQQYTLCSASLQDIIARFEKRSGRTVNWETLPDKVVVQMNDTHPTLCIPELIRILIDVKGLSWEKAWDITKRTVAYTNHTVLPEALEKWSLTLLQDLLPRHVEIIRKIDEEFIHEIISEYGTGDLNLLQGKLRKMRILENIELPDSVVVLLNNTIPAVDYVEEIDVDDNDIEATNKKDEDEEDGDEDEAGEDLVVENKIEMTFKVDRKLPMMVRMANLCVVGGFSVNGVAEIHSEIVKEEVFNEFYELWPEKFQNKTNGVTPRRWIRFCNPDLSKIITKWIGTEDWVTDLEKLAILRKFADNEELQLEWMESKRRNKIKVASFIKEKTGYVVSPNAMFDVQVKRIHEYKRQLLNIMGIVYRYKKMKELSAEERKQVFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVVFVPDYNVSVAEMLIPGSELSQHISTAGMEASGTSNMKFAMNGCVQIGTLDGANVEIREEVGEDNFFLFGARAQEIAGLRNERAEGKFVPDPRFEEVKSYVRSGVFGSYNYDDLIGSLEGNEGYGRADYFLVGKDFPSYLECQEEVDKAYRDQKKWTRMSILNTAGSYKFSSDRTIHEYARDIWRIEPVVLP* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3088 966 ProSitePatterns Phosphorylase pyridoxal-phosphate attachment site. 804 816 IPR035090 -
Psa7g3088 966 PANTHER ALPHA-1,4 GLUCAN PHOSPHORYLASE L-2 ISOZYME, CHLOROPLASTIC/AMYLOPLASTIC 25 966 - -
Psa7g3088 966 MobiDBLite consensus disorder prediction 522 544 - -
Psa7g3088 966 PIRSF Glucan_phosphorylase_GlgP 74 966 IPR000811 GO:0005975|GO:0008184
Psa7g3088 966 TIGRFAM P_ylase: glycogen/starch/alpha-glucan phosphorylases 550 960 IPR011833 GO:0004645|GO:0005975|GO:0030170
Psa7g3088 966 PANTHER GLYCOGEN PHOSPHORYLASE 25 966 IPR000811 GO:0005975|GO:0008184
Psa7g3088 966 CDD GT35_Glycogen_Phosphorylase 88 960 - -
Psa7g3088 966 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 81 963 - -
Psa7g3088 966 Gene3D Glycogen Phosphorylase B; 616 945 - -
Psa7g3088 966 Pfam Carbohydrate phosphorylase 550 960 IPR000811 GO:0005975|GO:0008184
Psa7g3088 966 Pfam Carbohydrate phosphorylase 170 493 IPR000811 GO:0005975|GO:0008184
Psa7g3088 966 Gene3D Glycogen Phosphorylase B; 72 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3088 Psa-Chr7 224904013 224909859 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3088 52 966 Glycosyltransferase AT3G29320 72.216 0.0 1396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3088 K00688 - gmx:100818065 1684.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3088 7 224904013 224909859 Psa7g3088 7 224904013 224909859 ECH