Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3075 ATGGCTTTTCTCATTTTTTTTCTGCTTTTTCTCTCCCTCACTGCTCATTCAAGTGGTCTTTATTGTGTATGCAAAGATGGTGTGAGTGATAAACTCCTTCAGACGGCGATTGATTATGCATGTGGAGCTGGTGCTGATTGCACCCCTATTCTTCAAAATGGACCTTGTTTCCAACCCAACACCGTGAAAGATCACTGTAATTATGCTGTTAATAGTTATTACCAGAATAAGGGCAATGTTCAAGGAAGTTGTGATTTTGCTGGTGCTGCAACACCTACTCCAACACCACCAAATACATCATCTGGATGTGTTTACCCCTCAAGTCCTGGAACACCGTCAACTGTTTCACCGCCGGGTTCGATTCCAGGCGCGGCGGGGAGTCCTAGTGGGATTGGAATGGGTCCATCTGCCACCGGTGATCCGTCTGGAGCTGGAGTGTCTTGTATGAAAAACACCAACACCATATTGCTATTTTTCTTTGTTGTGTATTTTGTGTTTATGGTATGA 507 0.4438 MAFLIFFLLFLSLTAHSSGLYCVCKDGVSDKLLQTAIDYACGAGADCTPILQNGPCFQPNTVKDHCNYAVNSYYQNKGNVQGSCDFAGAATPTPTPPNTSSGCVYPSSPGTPSTVSPPGSIPGAAGSPSGIGMGPSATGDPSGAGVSCMKNTNTILLFFFVVYFVFMV* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3075 168 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 1 156 - -
Psa7g3075 168 Gene3D - 14 108 - -
Psa7g3075 168 Pfam X8 domain 21 91 IPR012946 -
Psa7g3075 168 SMART X8_cls 20 105 IPR012946 -
Psa7g3075 168 PANTHER BETA-1,3 GLUCANASE 1 156 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3075 Psa-Chr7 223967072 223968572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3075 21 97 Glycoside Hydrolase AT2G01630 47.436 1.38e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3075 - - gmx:100776561 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3075 7 223967072 223968572 Psa7g3075 7 223967072 223968572 ECH