Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3068 ATGGGATTGGGATTCCACCATCTTGCATTGTTTCTCTTTTTGGCCTCTATTCAAGTTACTTTAAGTCGAGATATTGAACACGGTTCGCTACTAGTAAATGGAGCTCAAGCAAAAGCCGAAACAGGTGAAAACTTTATCTGTGCAACTATTGATTGGTGGCCACATGATAAGTGTGACTACGACCATTGCTCTTGGGGATATTCGTCTGTCGTAAATTTGGATGTATCTCGTCCTTTCCTTGCCAAGGCAATTCAAGCCCTCAAGCCGTTGAGGATAAGACTCGGAGGTTCTCTGCAAGATCAGGTGGTGTATGACGTAGGAAACCCGAACTCTCCTTGTCATCCATTTCAAAAGATGAAAGGTGGATTGTTCGATTTTTCAAAGGGATGCTTACACATGAAAAGATGGGATGAGCTGAATCAGTTTTTCAATCAGACAGGGGCCATTGTGACATTTGGCTTGAACGCGCTCCATGGAAAGCACCAGGTTGTTCCTAAAGTTTGGGAAGGAGCTTGGGATCCTACAAATGCTTATGATTTTATAAAGTACACGGTTTCGAAGGGATACAGGATCGACGCATGGGAACTCGGTAACGAGTTGAGCGGCAAGGGCATCGGTGCACGTGTTGGCGTTGCACAGTACGGGAAAGACTTGATCAACCTTAAACGGATTCTCGACACGTTATACGAAAACTCTAGATTCAAACCCTCACTTGTAGCACCTGGTGGCTTTTATGAAAAGGAATGGTATAATAAGCTTCTTCAGGTTTCTGGTTCCGGCATAATCAATGTTCTGACTCATCATATATATAATTTGGGACCAGGTAGTGACGGACATCTTGAAGGGAAGATTTTAGATCCCGATCGGTTGAGCAGGGTGGAAACGATTTTCAGCAATCTTTCAGAAACCATTCAAAAACACGGTCCTTGGACGTCTGCATGGGTAGGGGAAGCTGGCGGGGCTTACAACAGCGGTGGTCATGATGTTTCCAACACATTTCTGAATAGCTTTTGGTACTTAGATCAACTTGGAATCGCATCCACCTACAATACTAAAGTTTATTGTAGGCAGACATTAATCGGAGGGAACTACGGCCTTCTCAATACCTCCACTCTCACTCCAAATCCTGACTACTATAGTGCGCTTTTGTGGCAACGGTTGATGGGAAAGAAGGTTCTTGCAGTTTCCAGCGATATTTCTTCGCCATTTTTACGGACTTACGTCCATTGTTCAAAAGATAGAGCTGGCGTAACGTTACTGGTGATCAACTTAAGTAATCAAACGCACTTCATACTCAACGTGAAAAACCCTACGCGTGTTAAAAGAGACGAAGTGAGCAAAAACATTCATAAAGAAAGAAACTCATTCTTCGACAATCTCAAGAAAGCGTTCTCTTGGGTTGGAACGAAAGGCTCGGAGGTCACGTTCCGGGAAGAGTATCACTTAACTCCAGAAGATGATAACCTCAAAAGCCAAACCATGGTGCTGAATGGAATTCCACTCAAGTTAACAAATGAAGGGGATGTTCCAACAATGGATCCGGTTCGCAATAATGTGAGGTCTCCAATATATATAGTTCCTTTGTCAATTGCATTTGTTGTGTATCCAAACTTTGATGCTCCAGCTTGTGCTAGACACTGA 1641 0.4345 MGLGFHHLALFLFLASIQVTLSRDIEHGSLLVNGAQAKAETGENFICATIDWWPHDKCDYDHCSWGYSSVVNLDVSRPFLAKAIQALKPLRIRLGGSLQDQVVYDVGNPNSPCHPFQKMKGGLFDFSKGCLHMKRWDELNQFFNQTGAIVTFGLNALHGKHQVVPKVWEGAWDPTNAYDFIKYTVSKGYRIDAWELGNELSGKGIGARVGVAQYGKDLINLKRILDTLYENSRFKPSLVAPGGFYEKEWYNKLLQVSGSGIINVLTHHIYNLGPGSDGHLEGKILDPDRLSRVETIFSNLSETIQKHGPWTSAWVGEAGGAYNSGGHDVSNTFLNSFWYLDQLGIASTYNTKVYCRQTLIGGNYGLLNTSTLTPNPDYYSALLWQRLMGKKVLAVSSDISSPFLRTYVHCSKDRAGVTLLVINLSNQTHFILNVKNPTRVKRDEVSKNIHKERNSFFDNLKKAFSWVGTKGSEVTFREEYHLTPEDDNLKSQTMVLNGIPLKLTNEGDVPTMDPVRNNVRSPIYIVPLSIAFVVYPNFDAPACARH* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3068 546 Pfam Glycosyl hydrolase family 79, N-terminal domain 29 344 IPR005199 GO:0016020|GO:0016798
Psa7g3068 546 PANTHER GLYCOSIDE HYDROLASE FAMILY 79 AMINO-TERMINAL DOMAIN PROTEIN 7 546 - -
Psa7g3068 546 PANTHER HEPARANASE-RELATED 7 546 - -
Psa7g3068 546 Gene3D Glycosidases 63 386 - -
Psa7g3068 546 SUPERFAMILY (Trans)glycosidases 43 388 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3068 Psa-Chr7 223758378 223762271 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3068 3 544 Glycoside Hydrolase AT5G07830 59.489 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3068 K07964 - gmx:100807012 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3068 7 223758378 223762271 Psa7g3068 7 223758378 223762271 ECH
Psa7g3068 7 223758378 223762271 Psa4g1134 4 81614091 81620557 PCT