Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3065 ATGCTCAACAACCACCGCAACTCAATCGGAAAACCATCTAAACGACCTTCGTCCATCACCGGACCACCTCCATCAAAATCCCTTCCGCGACCTCACTCCACCTCCATCGCCACAACCCGCCGCGAGAACTCACAACAACACACCTCTGACTCATTTTGTGGTTTCACTCCAAAGAAATATCGCCACCACCAAACACCCCCCCTCCCCGCTCTTCCAAACGCACCACAACCAACCGCCTCTCTCTTCCACCTGCATCGCCGTTCTCTTCGGTGTCTTCCCGCAAATTTCCATGCCTATTTCCAAATGGCTTCGGAGAAGAAGTTATCGAATCCAATGAGAGAAATCAAAGTACAGAAACACTTTCTCAATATTTCCGTCGGTGAAAGTGGCGATCGTTTAACCAGAGCCGCCAAGGTTCTTGAGCATCTTAATGGCCAAAGCCCTGTTTTTTCCAAAGGTACTTTCTAA 468 0.4936 MLNNHRNSIGKPSKRPSSITGPPPSKSLPRPHSTSIATTRRENSQQHTSDSFCGFTPKKYRHHQTPPLPALPNAPQPTASLFHLHRRSLRCLPANFHAYFQMASEKKLSNPMREIKVQKHFLNISVGESGDRLTRAAKVLEHLNGQSPVFSKGTF* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3065 155 MobiDBLite consensus disorder prediction 1 72 - -
Psa7g3065 155 MobiDBLite consensus disorder prediction 1 15 - -
Psa7g3065 155 PANTHER 60S RIBOSOMAL PROTEIN L11 102 153 - -
Psa7g3065 155 Gene3D - 102 154 IPR022803 -
Psa7g3065 155 MobiDBLite consensus disorder prediction 30 53 - -
Psa7g3065 155 SUPERFAMILY RL5-like 101 152 IPR022803 -
Psa7g3065 155 Pfam Ribosomal protein L5 110 152 IPR031310 -
Psa7g3065 155 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 102 153 IPR002132 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3065 Psa-Chr7 223578588 223580418 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3065 102 155 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 81.481 4.15e-25 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3065 K02868 - lja:Lj0g3v0238619.1 92.4337