Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3058 ATGCCAAGGACTGAAATTAAGCCGCTTTCAGGAAAGCCATACTTTCATGTGGTTATTTCAAAATCACATGTTAGTCCTCGATATGGACTGGTAATTTCAAAATCACATGTTAGTCCTCGATATGGACTGGGGCCGAGTGGCAAGATATGCCAAAAACTTCCTTTTGATTCGGTTCCTACTGTTCTCAACTGTCGTGGCAAGAGCTGGAACATGACTTATAATGGTGGAAACAAAAACAAGCAGTTTGATACTATTGGCTGGAGAAATTTTGTTAAAGATAATAATTTGAAAGTCGGAGACGCCTGTGTTTTTGAGCTCGTGGAAAACAGTGAAGAGAAAATCATGTTTGAAGTTCAAATTCTTAGAGCTGAAGCTAACCTTCTGGGCTTGAATGCCACGTACCTTTGTGGAATGGTTCATGGTGGCAAGATACTTTTGTTGTGGAATGGTTAG 453 0.4018 MPRTEIKPLSGKPYFHVVISKSHVSPRYGLVISKSHVSPRYGLGPSGKICQKLPFDSVPTVLNCRGKSWNMTYNGGNKNKQFDTIGWRNFVKDNNLKVGDACVFELVENSEEKIMFEVQILRAEANLLGLNATYLCGMVHGGKILLLWNG* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3058 150 Pfam B3 DNA binding domain 15 117 IPR003340 GO:0003677
Psa7g3058 150 ProSiteProfiles B3 DNA-binding domain profile. 60 124 IPR003340 GO:0003677
Psa7g3058 150 CDD B3_DNA 13 122 IPR003340 GO:0003677
Psa7g3058 150 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS04G0386900 6 125 - -
Psa7g3058 150 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 6 125 IPR044837 -
Psa7g3058 150 Gene3D - 4 125 IPR015300 -
Psa7g3058 150 SMART B3_2 15 124 IPR003340 GO:0003677
Psa7g3058 150 SUPERFAMILY DNA-binding pseudobarrel domain 11 113 IPR015300 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3058 19 124 REM Transcription Factor Family AT4G33280 32.110 1.17e-08 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Psa7g3058 B3 1.1e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3058 - - mtr:MTR_4g083390 151.369