Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3050 ATGGTCGTGGCAGAGGAAGAGACTTTCATCAGCAACAACAACCAAGTGCCGGTTGTGGTGGCAGAGGAAGAGGAAGGGAGTTTTGCCAGCATCAAGAAACCAGTGCCGGTAATGGTCACGGCAGAGGAAGAGCAAGAGAATTTGACCCGTATCAAGAAACCAGTTCCGGTAATGGTGGTGGCAGAGGAAGAGCTAGAGAATTTTACCCGTATCAAGAAACCAGTTCCGGTAATGGTGGTGGCAGAGGAAGAAGCAAAGAGATTTTTATTCAGCCATACAGAAACCAGTACGGAGATTTTGGTGTGGGCAGGAAGAGCCCAAGGGAGTCTCTTATCAGACATTCAGAAACCAGTTTCCGGTATGGTTGGTGGCAGAGGAAGAGCAAGAGATTTTTATCAGCATCAAGAAACCAGTACGGAGATGGTCGTGGCAGAGGAAGAGCAAGGAGTTATCAGAATCAAGAAACCAGTTCCGGTAAATGGTGGTGGCAGAGGAAGACCAAGAGTTTATCAGCATCAAGAAACCAGTACCGGAGATGGTCGTGGCAGAGGAAGAGCAAGGGAGTTCTATCAGAATCAAGAAAACCATTCCGGTAATGGTGGTGGCAGAGGAAGACCAAGAGATTTTTATCAGCATCAAGAAACCAGTACCGGAGATGGTCATGGCAGAGGAAGAGCAAGGGAGTTTTATCAGAATCAAGAAACCAGTGCCGATAATGGTGGTAGCAGAGGAAGAGGAAGAGAGTTTCATCAGCGTCAAGAAACCAATGCCGGTGCAGGTGGTGGTGGTGGCGGCGGCGGAGGAGGGTTACAACCCCAACCACAAACCTGTTGGTCGCGAAGGCCTAATATGTCTCCCTCCTTCACCAACACAAACTCATCTTCAACTCCTCCTCTTCCTATCACTAAACACACCAATCTTCAACCCCAAGTCCAAACTCATCCACTTCCAGATATTGGAGTTCTGAATGTAAAAGAGCAGCCAAGGGAAAGTCCAGCAACTAGACCCATACACCGGCCTGATAAGGGAGGGAAGGCGTATATTCGAAGATGCAAACTTCATGTGAATCATTTTCCGGTTACCTACAAACCAGAAAGAACTATCATGCACTACGATGTGGATGTGAAGGCTACTTTGCCGCTCAGAAATGCTTCTTCCCCTCCAAAAAAGATTTCCAAGTTCGACTTATCTTTGATCCGAGACAAATTGCTTACCGAGAGACCGACTTTGTTGATGACTGCTTATGATGGAGGAACAAACATCTATAGTGCTGGTGAATTGCCTGAAGAAACTTTTACTGTGGAGGTCTCAAGAGGTGAAGATGAAAGAGCTGTTTCATATACAGTTACTATAAAGCTGGTGAACAAACTCGAGCTTCGCAAGTTGGGAGATTACATTGAGGGCGGAGTGTATTCCATTCCGAGGGATATTTTACAGGGAATGGACTTGGTGGTAAAAGAGAATCCAACAAGGCGCACAGTTGCTTTGGGACGATGTTTCTTTCCCACCAATCCTACCATGAAAGAGATGGATCTTACAGGCGGTATAGTTGCAATTGGAGGGTTTCATCATAGTCTCAAAACCACATCTCAGGGTTTATCTTTATGTCTTGACTATTCAGTTTTGCCTTTTCCAAAGAAAATGGAAGTCCTGGATTTCCTCCGTGAGCGTATAAATCATCTCAATTTGGATCAGTTTGAGAAATTTAGGAAAGTTGTCGAGAAGGAACTCGTTGGATTGAAAGTAAATGTCACTCATAGGTTAACCAAACAAAAATACACCATTGCTGGGTTAACACGTGAAAAAACACGCGATATCACTTTCCCTTATTTGGACGAAGAGGGCCGAAACCCCCCTAGCAGCAAATATCTTACTGACTACTTTAAAGAAAAACACTCCTTCAATATTGAACACAAAGATATTCCTTGTTTGATTTTTCGCGGAAGCAAGACTAATTACATGCCTATGGAGCTCTGCATCTTGGTTGAGGGTCAGAGATATCCCACAGACAGTCTTGATCTCTATGCATCCACGAAGTTGAAAAATATGTCTGTGGCTAGTCCAAAGGATAGAAAATCTTCAATAGAATTGATGATGACGTCTCCTGTTGGACCACACGGCGGTGATATTCTTCAGGATTTTGGAATGGATGTCATCCCTTCCATGACAAATGTGACTGGACGTGTAATTGAGCCTCCGATATTGAAGTTAGGTGATCCAAATGGAAAGAGTGGTACTATGAATCTGAGGGTGGAGAAATGTCATTGGAATTTAGTTGGAAAGTCAATGGTGGATGGAAAACCGGTTGAGCATTGGGGCATCCTTGATTTTACCAGTAAGGGATCTCGCCACAAATTTAATCATTATCAGTTTGTAACAGATCTTAAGGAAAAGTACAAGATGATGGCCATTGACATGAAGGATCCTGTTTTGTATGAGGAATCTGAAATGAAGAAACTTGGGGATTACAATTCACTATCAAAATTACTTGAACGGATAAATCGTCAACAGCCCCTGCAGTTTCTTCTTTGTGTGATGGACAGAAGGGATGAAGGTTACAAGCGCCTCAAGTGGATTGCTGAGACCAAGGTTGGCATAGTGACACAATGCTGCTTATCTCCTAATGCTAATAAAAGTATTACTAATAAAGGGAAAGACCAATATTTAACCAATCTTGCTCTAAAAATCAATGCGAAAATTGGAGGCAGTAACGTAGAGCTCCTTAATAGAATACCACACTTTGAGAATGACAAGCATGTTATGTTCATAGGGGCCGATGTCAATCATCCAGGTTCTCAGGACAAAGAAAGTCCATCAATTGTTGCTGTGGTTGCCACAGTTAACTGGCCAGCTGCAAATCGCTATGCAGCACGAGTTCTTGTTCAAGAGCATCGAATGGAGAAGATTTTGAATTTTGGAGAAGTTTGCCTTGACCTTGTCACACATTATGCAAAGTTGAACAAATCCAGGCCGGGAAAAATTGTTATCTTTCGTGATGGTGTTGGTGAAAGCCAGTTTCACATGGTTCTTACAGAGGAGTTGAAAGATTTGAAGATCGCATTTGAGCGTATAAATTACTCTCCAAGTATCACTCTTATTGTAGCTCAAAAGCGTCATCAAACTCGATTGTTTCCCGTAGATGCGAAAGGGGTTTGTACTGGCAACGTGTTCCCTGGAACAGTGGTAGACACAGATGTGGTACATCCTTTTGAGTTTGATTTCTACCTCTGTAGTCATAATGGAAGCCTAGGTACAAGCAAACCCACTCATTATCATGTGTTGTGGGATGAGCACAAGTTTAGTTCCGATGATTTGCAGAAACTGATATATAATCTATGCTTTACCTTTGCAAGATGCACTAAATCTGTATCTTTAGTCCCTCCAGTGTACTATGCTGACCTTGCTGCATATAGAGGAAGATTATACTATGAAGCAAGGAAGTCAGCGAAGAGAAATGATGAGGTGTTTGCCAAGTTGCATCCTGATACGGAAAACATAATGTTCTTCGTCTGA 3513 0.431 MVVAEEETFISNNNQVPVVVAEEEEGSFASIKKPVPVMVTAEEEQENLTRIKKPVPVMVVAEEELENFTRIKKPVPVMVVAEEEAKRFLFSHTETSTEILVWAGRAQGSLLSDIQKPVSGMVGGRGRARDFYQHQETSTEMVVAEEEQGVIRIKKPVPVNGGGRGRPRVYQHQETSTGDGRGRGRAREFYQNQENHSGNGGGRGRPRDFYQHQETSTGDGHGRGRAREFYQNQETSADNGGSRGRGREFHQRQETNAGAGGGGGGGGGGLQPQPQTCWSRRPNMSPSFTNTNSSSTPPLPITKHTNLQPQVQTHPLPDIGVLNVKEQPRESPATRPIHRPDKGGKAYIRRCKLHVNHFPVTYKPERTIMHYDVDVKATLPLRNASSPPKKISKFDLSLIRDKLLTERPTLLMTAYDGGTNIYSAGELPEETFTVEVSRGEDERAVSYTVTIKLVNKLELRKLGDYIEGGVYSIPRDILQGMDLVVKENPTRRTVALGRCFFPTNPTMKEMDLTGGIVAIGGFHHSLKTTSQGLSLCLDYSVLPFPKKMEVLDFLRERINHLNLDQFEKFRKVVEKELVGLKVNVTHRLTKQKYTIAGLTREKTRDITFPYLDEEGRNPPSSKYLTDYFKEKHSFNIEHKDIPCLIFRGSKTNYMPMELCILVEGQRYPTDSLDLYASTKLKNMSVASPKDRKSSIELMMTSPVGPHGGDILQDFGMDVIPSMTNVTGRVIEPPILKLGDPNGKSGTMNLRVEKCHWNLVGKSMVDGKPVEHWGILDFTSKGSRHKFNHYQFVTDLKEKYKMMAIDMKDPVLYEESEMKKLGDYNSLSKLLERINRQQPLQFLLCVMDRRDEGYKRLKWIAETKVGIVTQCCLSPNANKSITNKGKDQYLTNLALKINAKIGGSNVELLNRIPHFENDKHVMFIGADVNHPGSQDKESPSIVAVVATVNWPAANRYAARVLVQEHRMEKILNFGEVCLDLVTHYAKLNKSRPGKIVIFRDGVGESQFHMVLTEELKDLKIAFERINYSPSITLIVAQKRHQTRLFPVDAKGVCTGNVFPGTVVDTDVVHPFEFDFYLCSHNGSLGTSKPTHYHVLWDEHKFSSDDLQKLIYNLCFTFARCTKSVSLVPPVYYADLAAYRGRLYYEARKSAKRNDEVFAKLHPDTENIMFFV* 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3050 1170 Pfam N-terminal domain of argonaute 349 484 IPR032474 -
Psa7g3050 1170 Gene3D - 729 908 - -
Psa7g3050 1170 Gene3D - 914 1170 IPR036397 GO:0003676
Psa7g3050 1170 SMART DUF1785_2 494 547 IPR014811 -
Psa7g3050 1170 Pfam Piwi domain 842 1143 IPR003165 GO:0003676
Psa7g3050 1170 MobiDBLite consensus disorder prediction 230 249 - -
Psa7g3050 1170 SUPERFAMILY PAZ domain 544 696 IPR036085 GO:0005515
Psa7g3050 1170 SMART PAZ_2_a_3 552 686 IPR003100 GO:0005515
Psa7g3050 1170 CDD Piwi_ago-like 710 1143 IPR045246 -
Psa7g3050 1170 Pfam PAZ domain 565 672 IPR003100 GO:0005515
Psa7g3050 1170 CDD PAZ_argonaute_like 548 662 - -
Psa7g3050 1170 Gene3D paz domain 543 667 - -
Psa7g3050 1170 ProSiteProfiles PAZ domain profile. 548 663 IPR003100 GO:0005515
Psa7g3050 1170 SMART Piwi_a_2 841 1144 IPR003165 GO:0003676
Psa7g3050 1170 ProSiteProfiles Piwi domain profile. 841 1144 IPR003165 GO:0003676
Psa7g3050 1170 MobiDBLite consensus disorder prediction 157 185 - -
Psa7g3050 1170 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 329 1148 - -
Psa7g3050 1170 Pfam Argonaute linker 1 domain 496 545 IPR014811 -
Psa7g3050 1170 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 329 1148 - -
Psa7g3050 1170 SUPERFAMILY Ribonuclease H-like 827 1144 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3050 Psa-Chr7 222539622 222543572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3050 328 1148 Eukaryotic Initiation Factors Gene Family AT1G48410 36.249 1.81e-151 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3050 K11593 - gmx:100805250 1140.56