Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3034 ATGTCAACCCTTCAACACAACACCCCATCTCCCTCCGTTTCTGTTTTTGGATCTGGAAAATTCTCGAGATCCTTTAAGGAGGTTCCATCTCTTGTTACTACCAGTGATGACTGGAAAGGAACCGCCGTACGTGAATCGGAGGACGAAATTGATTGGTCAACCATGCTGCCGGATTTACTTGCGGAGATTATTAAACGAGTTGACGTTGCTGAGGATCAATGGCCGCACCATCAAAATGTCGTCGCTTGCGCATGCGTTTGCAAACGGTGGAAGGATGTTACACGAGAAACCGTACGGTCACCACGTGATGGCAGAATCACTTTTCCGTCTTGTCTTAAACAACCAGATTCACGTGACCTACCTCATCAATGTCTTATAAAGCGGGATAAAAAGACCTCCATGGTTTATCTTTGA 414 0.4589 MSTLQHNTPSPSVSVFGSGKFSRSFKEVPSLVTTSDDWKGTAVRESEDEIDWSTMLPDLLAEIIKRVDVAEDQWPHHQNVVACACVCKRWKDVTRETVRSPRDGRITFPSCLKQPDSRDLPHQCLIKRDKKTSMVYL* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3034 137 SUPERFAMILY F-box domain 55 96 IPR036047 GO:0005515
Psa7g3034 137 PANTHER TUBBY-LIKE F-BOX PROTEIN 7 37 137 - -
Psa7g3034 137 Gene3D - 44 99 - -
Psa7g3034 137 PANTHER TUBBY-RELATED 37 137 - -
Psa7g3034 137 Pfam F-box domain 57 95 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3034 Psa-Chr7 220776587 220777167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3034 52 137 TUB Transcription Factor Family AT1G53320 58.621 4.49e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3034 K19600 - gmx:100801919 158.688