Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3031 ATGGTGAAAGCAGCGAGCGAGAATGGCTCTTGTTCCGTGGCACCTTTCTTGACCAAATGTTACGATATGGTTGAAGATCCTTCCACCGACTCCATCATCTTTTGCTTCGTCAGACAACTCAATATCTATGGTTTCAGGAAAATTGATACGGATAATTGGGAATTTGCCAATGAAAACTTCATTAGGGGTCAAAAGCATTTGTTGAAGAATATACGTAGAAGGAAACATCCACATGTTACAGATCAGCAAAAAGCATTGCCGCAGAAAAACAATTCTGATGAACCGTCGCTAGAAGCAATTAATTCTAGCCTGTGGAAACAAGTCGAGAATCTCAAATCGGATAGAAAAACCCTGACACAGGAGTTGGTTAAACATAAGCAGCACCTTGAATCCTCTGAGAGTAAGTTGCTTCTATTGAGTGATCGTCTGGATGGAATGGAGAAGCATCAACACAACAGCAGATGCTATCAAGAAGGGAATATGTGGGACCACAGTAGCCAAGATGACGAACCAGTTCCTTCAGATGGAATCATTGTGAAGTATAAGCCACCTGTAAGTGAAACACTAAAGCCTGTAGTTCCGCTATCTTCTGCCTTTGAACCAGAACCTGAACTTTCTGCAGACGGGATGAAAGACTTGTGCATCAGTTCTGAGTTCTTGAAATTGCTCTTAGATGAAAAGTTATCTCCATTAGATAACCATTCTCCGTTTCTCGTACCGGATTTACCTGATGATGGTTCGTGGGAAAAACTTTTTTTGGGCTGTCCTTTCCCCGAAAATGTTGAAGATACTGATCATGAAAATGAGAGGCACAATGTTAGTGAAATGGAGATGGAACCTATCACGGAAACTCCAAATGAAAGATCTGCTTTTGAAGCAATGATTGTAGAAATGGAGAAAACTCAAGCATGA 912 0.4112 MVKAASENGSCSVAPFLTKCYDMVEDPSTDSIIFCFVRQLNIYGFRKIDTDNWEFANENFIRGQKHLLKNIRRRKHPHVTDQQKALPQKNNSDEPSLEAINSSLWKQVENLKSDRKTLTQELVKHKQHLESSESKLLLLSDRLDGMEKHQHNSRCYQEGNMWDHSSQDDEPVPSDGIIVKYKPPVSETLKPVVPLSSAFEPEPELSADGMKDLCISSEFLKLLLDEKLSPLDNHSPFLVPDLPDDGSWEKLFLGCPFPENVEDTDHENERHNVSEMEMEPITETPNERSAFEAMIVEMEKTQA* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3031 303 Gene3D - 34 75 IPR036388 -
Psa7g3031 303 SMART hsfneu3 12 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Psa7g3031 303 Pfam HSF-type DNA-binding 35 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Psa7g3031 303 MobiDBLite consensus disorder prediction 74 96 - -
Psa7g3031 303 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-8 36 151 - -
Psa7g3031 303 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-8 156 284 - -
Psa7g3031 303 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-8 1 33 - -
Psa7g3031 303 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 33 IPR027725 -
Psa7g3031 303 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 156 284 IPR027725 -
Psa7g3031 303 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 36 151 IPR027725 -
Psa7g3031 303 Coils Coil 108 135 - -
Psa7g3031 303 SUPERFAMILY "Winged helix" DNA-binding domain 12 74 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3031 Psa-Chr7 220517751 220519081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3031 13 256 HSF AT1G67970 34.983 8.47e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Psa7g3031 HSF_DNA-bind 2.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3031 K09419 - gmx:100813694 385.571