Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2985 ATGAATGATATGAAAATTAGGGATGATAGGGAAATGGAAGCTACCGTTGTTGACAGTGGCAATGGAACGGAGACTGGACATATCATTGTAACTACTATTGGTGGTAGAAATGGTCAGCCAAAGCAGACTATAAGCTATATGGCAGAGCGTGTTGTAGGACATGGATCATTTGGAGTTGTCTTCCAGGCTAAGTGCTTTGAAATAGGTGAAACTGTGGCTATCAAAAAGGTTCTTCAAGACAAGAGGTATAAGAACGGGGAATTGCAAACAATGCGCCTTCTTGATCACCCAAATGTTGTCTCGTTAAAGCATTGTTTCTTTTCAACCACTGAAAAGGATGAACTATACCTTAATTTGGTACTTAAATCTTTAGGGCATTGTCTTATATTCATCGTTGTATTGGAGTCTGCCATTGAGATATCAAACCTCAAAATCTATTGGTCAATCCACACACCCACCAGAGCACCTGAGCTTATTTTTGGAGCAACTGAATATACTACAGCTATTGATGCCTGGTCTGTTGGTTGTGTTTTGGCTGAACTGCTGCTTGGACAGCCGTTGTTTCCTGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATCAAGGTATTCAATGAAATCACTTCGGCAGAAACAACAGATACAAATACAGGCATTCCATCACAATGTTGTGAGATTTCAAATGAGGATCAAAATCATATTGCTCCTGTTTCAAAGCCAACTTCAGGTGGAGAGAAACAGATTGATACGAGTTCTTCTTGTAATGATCAGAGTCATAGAATCATGCAAGAAGATACGAAGCTTGAGGAAGAAACATCTCCTGCTACTGTTAAAGTGGAACCAGTTCCCGTAACTTCCATGGTAACGGGGTCAACTTTTCATCATAATTCGTCAGTTGCACGTCCTACTAGTACTGTTCAAGGAGTTCTAAGCTTGCAGACATCTTCTCCGTCTTCTGTTTCTCAAGATATTATGACGAGTAATGAAAATGCACAGGATACAAAGCCAATAATGTCAATGTTGCAGCCACGTCCTGTGAATCAAGCTCAAGCAAATGTGAACATTTTGAATAATCTCTCTCAAGCACGGCAGGTAATGAACTCTGCTGCTTTAAGTGGCGGAACTTCTATGGGACTTCCATCAATGGGTCAGACTCATCCTGTGAATCAAGCTCAAGCAAATGTGAACATTTTGAATAATCTCTCTCAAGCACGGCAGGTAATGAACTCTGCTGCTTTAAGTGGCGGAACTTCTATGGGACTTCCATCAATGGGTCAGACTCCTATTGCTATTCACATGTCAAACATGATATCCAGTGGGACGACATCTTCTGGACCTGCAGGTCAAAATGTATTTTCATCTGGACCGCCAGTAATAACTAGTTCTGGATCTCTTACTGCTTCTGCACAGGTCCGACAAAACTCAGGTCTTGCTTCATTACCATCAGCCACTTCTAATTTGTCTTCAAGTCCAAACAATGGGATTTCACAACCATCAACTAATCTTCAAGGAGCGGTTAGTATGGGACAACAGGTTCCCGATGTCTCTTCTGGAACTGGCGCAATGATCCCTACTCCAGGAATGACTCAACAAGTACAATCAGGCATGCCACCGCTTGCAAATAATGCAACTACTGCTAATATGCCTTTGCCACAACAGACAGTTTATGTACAGTCCAAATATATAAGGGTCTGGGAGGGAAGCTTATCGGGACAAAGGCAAGGACAACCAGTATTTATCACCAAACTTGAAGGTTACAGGAGTTCTTCTGCCTCGGAGACACTTGCAGCAAACTGGCCTCCTGTGATGCAAATAGTTTGGCTTATCTCTCAGGATCACATGAATAACAAGCAATATGTTGGAAAGGCAGATTTCCTAGTTTTTCGCGCAATGAACTCTCATGGATTTCTGGGTCAGCTCCAAGAAAAGAAGCTGTGTGCAGTTATTCAATTGCCATCACAGACGTTGCTACTATCTGTTTCTGACAAGGCCTGCCGCTCAATCAGGACTAACCTTACAGCAAGTGGACCAAGGCCTAATCCACAAGAATCCTACCATTACGGTCTCATAAACACGAGACAATCATTTTGTCTAGTTCTCCTAGTCAAGTTAATGGCAAGCAAAGATACACGCTTAACAGTGTGTCTTACATTTCACCAGACACGCCTCTTAAGCTCACTGATTACTTCAAAGTCCCCGGGTGATGGAACATATATGCAGGCATTGGATGGCTCTACGCAGACTAAGGAAAACTCGGTGTCAAAGCACCGCCAGTCAGAATTGACAGTCAAGCAGAATATGGAGCTCTGTCGAGAGGAGATGGAGCTATAA 2331 0.4264 MNDMKIRDDREMEATVVDSGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCFEIGETVAIKKVLQDKRYKNGELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLKSLGHCLIFIVVLESAIEISNLKIYWSIHTPTRAPELIFGATEYTTAIDAWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVFNEITSAETTDTNTGIPSQCCEISNEDQNHIAPVSKPTSGGEKQIDTSSSCNDQSHRIMQEDTKLEEETSPATVKVEPVPVTSMVTGSTFHHNSSVARPTSTVQGVLSLQTSSPSSVSQDIMTSNENAQDTKPIMSMLQPRPVNQAQANVNILNNLSQARQVMNSAALSGGTSMGLPSMGQTHPVNQAQANVNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPIAIHMSNMISSGTTSSGPAGQNVFSSGPPVITSSGSLTASAQVRQNSGLASLPSATSNLSSSPNNGISQPSTNLQGAVSMGQQVPDVSSGTGAMIPTPGMTQQVQSGMPPLANNATTANMPLPQQTVYVQSKYIRVWEGSLSGQRQGQPVFITKLEGYRSSSASETLAANWPPVMQIVWLISQDHMNNKQYVGKADFLVFRAMNSHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRSIRTNLTASGPRPNPQESYHYGLINTRQSFCLVLLVKLMASKDTRLTVCLTFHQTRLLSSLITSKSPGDGTYMQALDGSTQTKENSVSKHRQSELTVKQNMELCREEMEL* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2985 776 Pfam Protein kinase domain 46 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2985 776 Pfam Protein kinase domain 154 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2985 776 SUPERFAMILY Protein kinase-like (PK-like) 46 208 IPR011009 -
Psa7g2985 776 MobiDBLite consensus disorder prediction 238 259 - -
Psa7g2985 776 ProSiteProfiles Protein kinase domain profile. 1 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2985 776 MobiDBLite consensus disorder prediction 238 276 - -
Psa7g2985 776 Gene3D Transferase(Phosphotransferase) domain 1 154 229 - -
Psa7g2985 776 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 124 - -
Psa7g2985 776 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 153 212 - -
Psa7g2985 776 ProSitePatterns Protein kinases ATP-binding region signature. 52 76 IPR017441 GO:0005524
Psa7g2985 776 Gene3D Phosphorylase Kinase; domain 1 30 124 - -
Psa7g2985 776 MobiDBLite consensus disorder prediction 260 274 - -
Psa7g2985 776 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 1 124 - -
Psa7g2985 776 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 153 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2985 Psa-Chr7 217747685 217751615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2985 39 204 Core Cell Cycle Gene Families AT1G73690 31.556 7.73e-22 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Psa7g2985 Pkinase 7.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2985 K15168 - gmx:100801664 492.271