Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2961 ATGGATCCTAACACCTTACATTCTTCACATTCACATTGTGTACAATTGGAAATTCACCAAGTAGTTCCACCGCCTCACAAAAGCACTTTACACAAACTCAAACTTCGACTCAAAGAAACTTTTTTCCCTGATGATCCTATGCGCCAATTCAAAGGAAAATCTCTTAAGATAAAACTTATCTTAGGAGCTAAATACATGTTCCCTATTCTTCAATGGGGTTCTAATTATAACTTGAAACTCTTTAAATCCGATCTCGTTTCCGGCCTCACTATCGCTAGCTTGGCCATACCGCAGGGAATTAGTTATGCTAAGCTTGCCAATCTTCCTCCAATTGTAGGACTATATTCTAGCTTTGTTCCTCCACTTATTTATGCTGTTCTTGGAAGTTCAAGGGATCTAGCAGTAGGACCTGTTTCAATTGCGTCGCTTGTTTTAGGATCTATGCTCAGACAAGAAGTGTCACCTTCTGGTGAACCTGTTCTGTTTCTTCAACTTGCTCTTACTTCAACTTTCTTTGCTGGTCTATTTCAAGCTTCACTAGGAGTTCTAAGGTTAGGATTTATTATTGATTTTTTATCTAAAGCAATCCTGATTGGGTTCATGGCTGGAGCTGCTATAATTGTGTCGTTGCAACAACTTAAGAGCTTACTTGGAATCACACACTTTACTAAAGAGATGGGTCTTGTTCCTGTTATGACTTCTGTTTTTCAAAATATACATGAGTGGTCATGGCAAACAATAGTGATGGGAATTTGCTTCTTGGTGATACTACTCATAGCAAGACACGTTAGCATAAGGAAACCAAAGCTATTCTGGGTCTCTGCTGGAGCTCCACTTATGTGTGTCATCATCTCTACTCTTCTGGCTTTTGCAATCAAGGCTCAAAATCATGGCATCAGTGTAATTGGAAAATTACAAGCAGGAATAAATCCTTCTTCATGGAATATGTTGAAATTTCATGGAAGCCACCTTGGTCTAGTTATGAAAACAGGCCTTATCACTGGCATTTTGTCACTAACTGAAGGTATTGCAGTTGGAAGAACATTTGCAGCTCTGGGAAACTACAAAGTAGATGGAAATAAGGAAATGATGGCAATTGGTTTTATGAATGTGGTTGGCTCTTTCACTTCCTGCTATGTCACAACAGGTGCTTTCTCTCGTTCAGCTGTTAATAACAATGCCGGAGCAAAAACAGCAGCTTCAAACATAGTAATGTCTGTGACAGTAATGGTGACACTCATTTTCCTTATGCCATTGTTCCAGTACACACCTAATGTTGTATTGGGTGCAATCATAGTCACCGCGGTGATTGGCCTTGTTGATATACCTGCTGCTTGTCACATTTGGAAGATGGACAAATTCGACTTCCTTGTGATGTTAACCGCTTTCTTAGGTGTCGTTTTCATCTCAGTCCAGGAAGGCCTTGCTATTGCAGTTGGATTATCGACTTTTAGGTTACTCCTGCAAATTACGAGGCCTAAAACAGTAATGATGGGGAATATACCAGGGACAGACATATATAGAAATCTTCATCAATACATGGAAGCTAAAAGAATACCAGGCTTTCTTATTTTAAGCATCGAGGCTCCCATCAATTTCGCAAACATCACATATCTCAATGACAGGACAATGCGATGGATTGAAGAGGAAGAGGAAGATAACGAAAAGGAACAGTCGAGCCTTCGGGTTTTAATCCTAGATATGTCAGCTGTGAGCGCCATTGACACAAGCGGAATCTCACTTTTCAAGGAATTAAAGGCAACAATGGAAAAGAAGGGCATTGAGCTTGTGTTGGTGAATCCTCTGGCTGAAGTCATAGAAAAGTTGAAAAAAGCAGACCACGCTAATAATTTCATTCGAGCAGACAGCCTTTTCTTGACAGTTGGAGAGGCTGTGGCTTCACTTTCATCAACAATGAAGAGCCAACCAACCACGACAGAAGAAACACAAAACCGTGCCACGTAA 1965 0.4036 MDPNTLHSSHSHCVQLEIHQVVPPPHKSTLHKLKLRLKETFFPDDPMRQFKGKSLKIKLILGAKYMFPILQWGSNYNLKLFKSDLVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPSGEPVLFLQLALTSTFFAGLFQASLGVLRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTKEMGLVPVMTSVFQNIHEWSWQTIVMGICFLVILLIARHVSIRKPKLFWVSAGAPLMCVIISTLLAFAIKAQNHGISVIGKLQAGINPSSWNMLKFHGSHLGLVMKTGLITGILSLTEGIAVGRTFAALGNYKVDGNKEMMAIGFMNVVGSFTSCYVTTGAFSRSAVNNNAGAKTAASNIVMSVTVMVTLIFLMPLFQYTPNVVLGAIIVTAVIGLVDIPAACHIWKMDKFDFLVMLTAFLGVVFISVQEGLAIAVGLSTFRLLLQITRPKTVMMGNIPGTDIYRNLHQYMEAKRIPGFLILSIEAPINFANITYLNDRTMRWIEEEEEDNEKEQSSLRVLILDMSAVSAIDTSGISLFKELKATMEKKGIELVLVNPLAEVIEKLKKADHANNFIRADSLFLTVGEAVASLSSTMKSQPTTTEETQNRAT* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2961 654 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
Psa7g2961 654 PANTHER BNAA09G30120D PROTEIN 17 637 IPR030313 -
Psa7g2961 654 PANTHER SULFATE TRANSPORTER 17 637 IPR001902 GO:0015301|GO:0016020|GO:0055085
Psa7g2961 654 SUPERFAMILY SpoIIaa-like 515 635 IPR036513 -
Psa7g2961 654 Gene3D STAS domain 492 638 IPR036513 -
Psa7g2961 654 ProSiteProfiles STAS domain profile. 512 635 IPR002645 -
Psa7g2961 654 Pfam Sulfate permease family 81 461 IPR011547 GO:0016021
Psa7g2961 654 CDD STAS_SulP_like_sulfate_transporter 513 613 - -
Psa7g2961 654 TIGRFAM sulP: sulfate permease 68 631 IPR001902 GO:0015301|GO:0016020|GO:0055085
Psa7g2961 654 Pfam STAS domain 513 631 IPR002645 -
Psa7g2961 654 Coils Coil 547 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2961 Psa-Chr7 214374721 214379544 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2961 16 643 Inorganic Solute Cotransporters AT3G15990 65.931 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2961 K17471 - gmx:100787284 1101.27