Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2932 ATGGTTTCATCAAAACATTATCAACTTTCATTTTCAATCACCTTCCTTCTATGTTTCCACTTAGCGAATTCTCAGATCATTGATGTTCCAATATTATCTCCAATATTATCTCCATTAGTCCCTGACATACTAAACTTCTTAGACCAAAGACTCGAATTGGTTTTCTCAATCATTCAAGCCTTCAAAAACACAATAACTTCAGATCCATTAGGAATAACATCAACATGGATTGGTTCTGATATATGCAACTACAAAGGCTTCTACTGCGATAACCCACCGGATAATCTCTCCGCCACCACTGTTGCCTCTGTCGACTTCAACGGCTTCAACCTCGCCGCCCCGTCTCTCGACAATTTCATCGACCAACTCCCTGACTTAGCTCTCTTCCATGCAAACTCCAACAATTTCTCAGGTACCATTTCACCGAAAATAGCATCGCTTAAATATCTATACGAACTCGATCTAAGTAACAACATGCTCTCCGGAACATTTCCATCCTCGATCCTGAACATGCCAACACTTTCGTTTTTAGATATTAGATTCAACCAATTCACCGGAACAGTTCCTCAGCAGATCTTCATCAAAACACTGGATGCAATTTTTCTCAATAACAACAACTTTCTTCTCACACTTCCAAACAATATAGGCGAAACAACAGCAGCTTATATCACATTCGCTAACAACAAATTCTCCGGTCCGATTCCTCCCAGCATAGGAAAAGCCTCGTCCACTTTAATCGAAGTTTTATTATTAAACAACCAGTTAACAGGTTGTCTTCCTTACGAAATAGGATTCCTTCAAAACGTCCAACTTTTCGATGCGGGTAGTAACCTTTTAACAGGTCCATTACCGTGGTCGTTTGCGTGTTTGAAGAAGGTGGAAGAGTTAAACTTTGCTAGGAACATGTTGTATGGTCAGGTTCCAGAAGTTGTTTGCGCGTTGGAGAACTTGTCGAATTTAACGTTGTCTTATAACTATTTTAACAGATTGGGCCCATTATGCAGAAAGCTTGTTAGAAATGGTGTACTTGATGTGAAGAATAACTGTATTTTCGATCTTCCTGATCAAAGATCGATGGAGGAGTGTGTGAAGTTCTTTTCTCTTCAGAGAACTTGTCCGCGTCCTGGAACGTTTAATGTTATACCGTGTCGGAGTCCAACACGGGCAAAACCACCCGGAAATAAGAGGAATTTGTTGTCATATTCAGCTCTTGAGAGAAACAGAATGGTTCTGATTTAA 1239 0.4011 MVSSKHYQLSFSITFLLCFHLANSQIIDVPILSPILSPLVPDILNFLDQRLELVFSIIQAFKNTITSDPLGITSTWIGSDICNYKGFYCDNPPDNLSATTVASVDFNGFNLAAPSLDNFIDQLPDLALFHANSNNFSGTISPKIASLKYLYELDLSNNMLSGTFPSSILNMPTLSFLDIRFNQFTGTVPQQIFIKTLDAIFLNNNNFLLTLPNNIGETTAAYITFANNKFSGPIPPSIGKASSTLIEVLLLNNQLTGCLPYEIGFLQNVQLFDAGSNLLTGPLPWSFACLKKVEELNFARNMLYGQVPEVVCALENLSNLTLSYNYFNRLGPLCRKLVRNGVLDVKNNCIFDLPDQRSMEECVKFFSLQRTCPRPGTFNVIPCRSPTRAKPPGNKRNLLSYSALERNRMVLI* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2932 412 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 9 407 - -
Psa7g2932 412 SUPERFAMILY L domain-like 58 351 - -
Psa7g2932 412 Gene3D Ribonuclease Inhibitor 220 371 IPR032675 -
Psa7g2932 412 PANTHER SCOPOLETIN GLUCOSYLTRANSFERASE 9 407 - -
Psa7g2932 412 Gene3D Ribonuclease Inhibitor 56 219 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2932 Psa-Chr7 209739353 209741261 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2932 46 367 Leucine-rich Repeat extension Gene Families AT3G24480 45.652 6.73e-92 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2932 - - gmx:100813314 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2932 7 209739353 209741261 Psa7g2932 7 209739353 209741261 ECH