Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2916 ATGTCCGATCAAGAGATCTCAAAAATGGAAGAAGGTGGTGACCTTAAGGCACAAAAACAACAGAAGGAGTTAGGGTTTTTTAATTCTCCTGAGGTAGTTCATACCATACAAAAGATAATAGCTGAGGTGATAGGAACATACTTCTTAATATTTGCAGGATGTGCTTCAGTGGTTCTGAATAATGTGGGAGAGAGTAAAGGAACGATAACGTTTCCCGGAATTTGTATCACATGGGGTCTATCGGTTATGATCTTGGTTTATTCTCTCGGTCACATCTCCGGTGCTCATTTCAATCCGGCCGTCACCATTAGCTTCGCTATCTACCGTCAGTTCCCACTCAAACAGGTGCCGATGTATATTATTGCACAAATGGTAGGATCTATCCTTGCTAGCGGAACATTGTGCCTTCTTTTTGAGCTAGATGAAAAATCGTTTTTCGGAACAGTACCGTCTGGATCTCATGTTCAGTCTCTTGTTTTCGAGATACTCGCATCATTTCTATTGATGTTTGTTATATCTGCTGTTTCCACAGACAACAGAGCTGTCGGAGAATTGGCCGGGATTGCCGTTGGTATGACAATCATAGTAGATGTATTCATGGCGGGGCCTATCTCAGGTGCATCAATGAACCCAGCAAGAAGCATTGGACCTGCATTGGTGATGCACATTTACACTGGAGTATGGGTTTATATAGTTGGACCCATTCTTGGTACCTTTCTAGGTTCCTCAGCCTACAACTTGATCAGATTCACTGACAAACCACTAAATGAAATAAGTCGAACCTCAAGCTTCCTCAAAAGTGTTTCAAGATCAAGAGAAAGCTTTTAG 828 0.4203 MSDQEISKMEEGGDLKAQKQQKELGFFNSPEVVHTIQKIIAEVIGTYFLIFAGCASVVLNNVGESKGTITFPGICITWGLSVMILVYSLGHISGAHFNPAVTISFAIYRQFPLKQVPMYIIAQMVGSILASGTLCLLFELDEKSFFGTVPSGSHVQSLVFEILASFLLMFVISAVSTDNRAVGELAGIAVGMTIIVDVFMAGPISGASMNPARSIGPALVMHIYTGVWVYIVGPILGTFLGSSAYNLIRFTDKPLNEISRTSSFLKSVSRSRESF* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2916 275 Gene3D Glycerol uptake facilitator protein. 2 259 IPR023271 -
Psa7g2916 275 TIGRFAM MIP: MIP family channel proteins 41 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g2916 275 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g2916 275 PRINTS Major intrinsic protein family signature 78 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g2916 275 PRINTS Major intrinsic protein family signature 115 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g2916 275 PRINTS Major intrinsic protein family signature 160 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g2916 275 PRINTS Major intrinsic protein family signature 191 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g2916 275 PRINTS Major intrinsic protein family signature 228 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g2916 275 CDD MIP 37 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g2916 275 PANTHER AQUAPORIN NIP-TYPE-RELATED 7 272 - -
Psa7g2916 275 SUPERFAMILY Aquaporin-like 34 257 IPR023271 -
Psa7g2916 275 Pfam Major intrinsic protein 33 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g2916 275 PANTHER AQUAPORIN NIP2-1 7 272 IPR034294 -
Psa7g2916 275 ProSitePatterns MIP family signature. 96 104 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2916 Psa-Chr7 209087362 209089210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2916 1 273 Major Intrinsic Protein MIP AT5G37810 60.806 1.30e-118 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2916 K09874 - gmx:100819179 371.703