Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2909 ATGACAATCATGGATATGAGTGTAGATCGTGATCAAGGTGTCAATGACGATTTTATGTGGAAAAATCAACCATGGAGTGATCTTACAAATTCTGAAAACTTTGGTGGTAACAGTAGCAAACATAAGTTATATAAGAAACCAATGAATGAAAAAGAAGGTATTAATGAAGTAGAAGTTCATGTGAATAAAAAACGAAGTCGAGGTGGAGCTGTGATTAGAACGGAGAATAACATTGCAAATGGAGAAAAAAAAGATGGAAGGTATCACGACTCTGAAAAGGAAGTGCATATATTCACAGAGAGAGAAATGAGAAATAAAATGAAGAATATGTTCGTCAGTCTTCATGCCTTACTTCTTGAACTACCTTCTAAGGTTGATAAATCATCAATTGTGGATGCGGCAGTGAAAAAAATAAACAATCTAAATCATGTTATTAAACAACTAGAAAAGAAGAAGCAAGAAAATCTCAAATCTATATCTAAATTTGGGACTGAGTCATCATTTATGAGGAACTCACACTTGCACCCCTATGAATCAAGGGAACCATTTATAGCTGATCAAAGATCCTCTAGTTATAATAATAACAACTTTCCTATTAGGGTAATGGGACATGCACCACAACAAGTAGGTTTTCAAAATTTGTCTTCTCCGAATTTTGTCTTGAACATTTGTGGTGCTGAAGCACAATTTTGCATGTGTACAACTAAGAAGCCATGTCCCTTGACAAAAATTGCTTTAATGTTGGAGAAGTATAGGATTGACGTTGTATCTTCCAGCATTATAATCAATGAAAATGGACATTTGTACATGATACTAATTCAGGCAAAACAACGTTCATTGGACACAAATTCTATGGAGGAAATTTACAAGCAAGCAGCTAGAGAAATTATGACCTGGATCTCTTAA 906 0.3433 MTIMDMSVDRDQGVNDDFMWKNQPWSDLTNSENFGGNSSKHKLYKKPMNEKEGINEVEVHVNKKRSRGGAVIRTENNIANGEKKDGRYHDSEKEVHIFTEREMRNKMKNMFVSLHALLLELPSKVDKSSIVDAAVKKINNLNHVIKQLEKKKQENLKSISKFGTESSFMRNSHLHPYESREPFIADQRSSSYNNNNFPIRVMGHAPQQVGFQNLSSPNFVLNICGAEAQFCMCTTKKPCPLTKIALMLEKYRIDVVSSSIIINENGHLYMILIQAKQRSLDTNSMEEIYKQAAREIMTWIS* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2909 301 PANTHER - 13 299 IPR044278 GO:0003700|GO:0006355|GO:0009960
Psa7g2909 301 Coils Coil 131 158 - -
Psa7g2909 301 Gene3D - 88 162 IPR036638 GO:0046983
Psa7g2909 301 CDD bHLH_AtbHLH_like 96 149 IPR045239 -
Psa7g2909 301 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 89 165 IPR036638 GO:0046983
Psa7g2909 301 PANTHER TRANSCRIPTION FACTOR BHLH95 13 299 - -
Psa7g2909 301 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 91 141 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2909 Psa-Chr7 208520922 208522914 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2909 16 301 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 30.380 1.78e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2909 - - mtr:MTR_4g085700 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2909 7 208520922 208522914 Psa7g2909 7 208520922 208522914 ECH