Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2861 ATGGGTTCTGTTTCTTCAGAACTGACTTTAGATTTAACACCCACTTTCGTCCCCAAAACCATCGCTAGTTTTCTCTACAATCTTTCCACAATTCAAACTTCCTCTCATAAACTCTCTAAACTCCACGATTTTCTCTCCAGATTGGAACAAGAACTCAACAAGATCCACGCATTCAAACGCGAACTACCTCTCTCCATGCTCCTCTTAAACGATGCAATCTTAATTTTGAAGGAGGAATTGGAGAAATGCAGACGTGAGAATTGTGTGCCGGTTTTGGAAGAGTTTATTCCGTTGAAGAAAGAGATTGATCATAGTGAGGAAAATCATGATATTGATAGAGATAAGAATAATGAATGCAGAGATAAGAAGAATTGGATGAGTTCTGTTCAGCTATGGAACACGACCACCACAACAACCACCACCACTACTAATAACAATGATAATAATAATAATGCTTATGAATCTGATCATAAAGTTCGGAACAATCAAAATAAATTAGAAACCAAGAAAAGGGAAGAGGAAGAAAAATCTGTGACGGTATCTGAAGATCGTTTTCAATCTTGTAGTAGTAATAGGAATGGAGGAAGTGCTTTTATGCCATTTTCAACTTATTCTTCTATTCCTGTGACGACAGTTACATTGGCTGCACCTAAAGATGAGAAAGATGAAAGTGGTGTGAATAGACTGTCTTTTATGATGCCTGGAGTGAAAGGTTTGAGGGAAGGATTTGATTCGAGGGGATCGAGGAGTAGTTCCAGCAGGGCTGTTTCTGTTTCGTCTTCTCCTCCCACGGTGCAGCCGAGTTTGCGCAGTGCGCCAGTTCAGCCGCAGCAGATTGCTAGGAAACAGAGGAGGTGCTGGTCGCCGGAGTTGCATCGGAGATTTGTTAATGCATTGCAGAAGCTTGGAGGCTCTCAAGCAACGCCAAAGCAAATCAGAGAACTGATGCAAGTTGATGGCTTAACTAATGATGAAGTGAAGAGCCATTTGCAAAAATACCGGCTTCATACACGGAGAGTTCCAGCTGCAAACGGTAACGAGTCTGTTGTAGTTCTTGGAGGTTTATGGATGTCTCAAGAACCATACAATGGATCTTCCAAAGGTAGCAGTTCGGCCTCCGGTTCTCCACAAAGTCCCCTTCATTTAGCTACAGGATCCCGGGGAGGGACATCCCGAACCGAAGGTGATAGCATGGAAGACGACGATGAAGATGCAAAATCAGAGAGTTATAGCTGGAAAAGTCATATTCAGAGACATGGACAAGTTGGTGTATAG 1275 0.4243 MGSVSSELTLDLTPTFVPKTIASFLYNLSTIQTSSHKLSKLHDFLSRLEQELNKIHAFKRELPLSMLLLNDAILILKEELEKCRRENCVPVLEEFIPLKKEIDHSEENHDIDRDKNNECRDKKNWMSSVQLWNTTTTTTTTTTNNNDNNNNAYESDHKVRNNQNKLETKKREEEEKSVTVSEDRFQSCSSNRNGGSAFMPFSTYSSIPVTTVTLAAPKDEKDESGVNRLSFMMPGVKGLREGFDSRGSRSSSSRAVSVSSSPPTVQPSLRSAPVQPQQIARKQRRCWSPELHRRFVNALQKLGGSQATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRVPAANGNESVVVLGGLWMSQEPYNGSSKGSSSASGSPQSPLHLATGSRGGTSRTEGDSMEDDDEDAKSESYSWKSHIQRHGQVGV* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2861 424 MobiDBLite consensus disorder prediction 138 187 - -
Psa7g2861 424 PANTHER TRANSCRIPTION FACTOR HHO6 7 417 - -
Psa7g2861 424 MobiDBLite consensus disorder prediction 363 424 - -
Psa7g2861 424 MobiDBLite consensus disorder prediction 363 392 - -
Psa7g2861 424 MobiDBLite consensus disorder prediction 242 285 - -
Psa7g2861 424 MobiDBLite consensus disorder prediction 158 181 - -
Psa7g2861 424 MobiDBLite consensus disorder prediction 245 282 - -
Psa7g2861 424 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 279 338 IPR017930 -
Psa7g2861 424 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 282 336 IPR006447 GO:0003677
Psa7g2861 424 Pfam Myb-like DNA-binding domain 284 334 IPR001005 -
Psa7g2861 424 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 7 417 IPR044787 GO:0003700|GO:0006355
Psa7g2861 424 Coils Coil 66 86 - -
Psa7g2861 424 MobiDBLite consensus disorder prediction 138 157 - -
Psa7g2861 424 SUPERFAMILY Homeodomain-like 280 339 IPR009057 -
Psa7g2861 424 Gene3D - 279 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2861 Psa-Chr7 205387012 205390470 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2861 5 360 G2-like Transcription Factor Family AT2G03500 39.108 4.81e-58 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Psa7g2861 Myb_DNA-binding 2.9e-07 CL0123