Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2828 ATGAACTTTTCTTGGGATGCAATGAGTGTGAAGCCATCTGGAAATGTTAATCTAGCGAGGCAGTCTTCGATATACTCCTTGACTTTTGATGAGTTGCAGAGTACGGTTGGTGGAGTTGGAAAAGATTTTGGATCAATGAACATGGATGAACTCTTGAAGAACATATGGAATGTTGAAGAGACTCAGGCGTTGACATGTTCGGCCGTTGGAGGGGGAGGAGAAGGACCTAACAGTACAATTGGTAGTAATTTGCAAAGACAAAGTTCCTTGACTTTGCCAAGGACACTTAGTCAGAGAAAAGTTGATGAGGTTTGGAAGGAATTGATGAAAGATGATGGAAATAGTGGTTCATCTATCCCTCAGAGACAGCCAACATTAGGTGAAGTGACCTTGGAAGAGTTTTTGGTGAGAGCTGGTGTTGTGAAAGAAGATGTGCCTAATCATGTTCAACAAATTGAAAGACCGAATAATAATGAATGGTTTAGTGGCTTCTCTAGATCAAACAACAGCACCAATCTACTTCGCTTTCAACAACCAAATCGAAATAATGGAGATATGAGTGATAATATTAACTTAGTTCCTAAACAGGTTCCGGTTCCTGTTTCTGTTCCTCTTCCTCCTTCATCAATTAACTTGAATCACTCGCAACGGCCGCCGCCCCTTTTCCCGAAACCTACAAATGTAGCATTTGCTTCTTCTATTCATATGCTAAACAATGCTCAACTCGGTAACCCGGGTAGACGGGGAGGAATGGTTGGAGTTCAAGAGCATTCCATGAATGGTGCATTAGTTCAAAACAGTGTAGCTCCTGGTGTTGGAATGATTGGTTTATCCGCGGCGAATGTCACGGCTCCTATTGCTTCTCCGGGAAGTAAACTGTCGCCAGACATAATTACAAAGCGTAATTTAGATCCTTTACTTTCACCAGTTGCTTATGGAATCAACAGAGGGAGGAAATTTGGTGCTGTAGAAAAAGTAGTCGAAAGGAGACAAAGGAGAATGATAAAGAATAGAGAATCAGCTGCGAGGTCACGCGCTCGCAAACAGGCCTACACTGTTGAACTAGAGGCTGAAGTTGCAAAACTTAAGGAAGTAAACGAGGAATTACAAAGAAAACAGGCAGAGTTTATGGAAATGCAGAAAAGCAAGGAGGATATGCTACAGGTAAATAAAATAAGATACTTGAGAAGGACACTTACAGGTCCATGGTAG 1212 0.4183 MNFSWDAMSVKPSGNVNLARQSSIYSLTFDELQSTVGGVGKDFGSMNMDELLKNIWNVEETQALTCSAVGGGGEGPNSTIGSNLQRQSSLTLPRTLSQRKVDEVWKELMKDDGNSGSSIPQRQPTLGEVTLEEFLVRAGVVKEDVPNHVQQIERPNNNEWFSGFSRSNNSTNLLRFQQPNRNNGDMSDNINLVPKQVPVPVSVPLPPSSINLNHSQRPPPLFPKPTNVAFASSIHMLNNAQLGNPGRRGGMVGVQEHSMNGALVQNSVAPGVGMIGLSAANVTAPIASPGSKLSPDIITKRNLDPLLSPVAYGINRGRKFGAVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAEVAKLKEVNEELQRKQAEFMEMQKSKEDMLQVNKIRYLRRTLTGPW* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2828 403 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 332 347 IPR004827 GO:0003700|GO:0006355
Psa7g2828 403 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 7 12 403 - -
Psa7g2828 403 CDD bZIP_plant_BZIP46 329 383 - -
Psa7g2828 403 Pfam bZIP transcription factor 329 383 IPR004827 GO:0003700|GO:0006355
Psa7g2828 403 SMART brlzneu 325 392 IPR004827 GO:0003700|GO:0006355
Psa7g2828 403 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 12 403 IPR043452 GO:0003700|GO:0045893
Psa7g2828 403 Coils Coil 348 382 - -
Psa7g2828 403 Gene3D - 327 385 - -
Psa7g2828 403 SUPERFAMILY Leucine zipper domain 329 379 IPR046347 GO:0003700|GO:0006355
Psa7g2828 403 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 327 372 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2828 Psa-Chr7 202321574 202324642 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2828 18 403 bZIP Transcription Factor Family AT4G34000 45.638 9.68e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa7g2828 bZIP_1 3.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2828 K14432 - gmx:100776600 460.685