Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2822 ATGGCTAGCAGTAGCAGAAACTCCTCAATTTCAGCTCTCAGAAATTCTAAGTATGATGTGTTTGTGAGCTTCAGAGGTGAAGACACTCGCAACAATTTCACTGATTTTCTTTTTCAAGCCTTTCAAACACAAGGCATTTTTGTATTTAGGGATGACACTAATCTTCCAAAAGGTGAATCCATAGCACCCGAACTCCTTCATGCAATCCAACACTCTCAGATCTTCGTTGTCGTCTTCTCAACCAACTATGCTTCCTCAACCTGGTGCTTGCAAGAATTGGATCAAATACGTGAATGCCTTCAACTGTCTGGAAAACACGTTCTTCCTGTTTTCTATGATGTTGATCCTTCTGAGGTCAGACATCAAAAAGGAAGCTATGCTGAAGCCTTTTCCAAACATGGACAAAGATTTCAACATGACTCTCAGATGGTGTCAAGATGGAGGGAAGCTCTAACACAGGTTGCAAATCTCTCTGGATGGGATCTGCGTCACAAGCCACAATCTGCCGCCATTAAAGAGATTGTTCAAAAGATAATTAATATACTGGATTGCCAATCTTCATGTGTTTCAAAAGATTTAGTTGTGATATTCGAAGACTTTTCAAATCTTAGATTGCTCATCGTCCATGAAATGAATGCATCAAGAAGCCTCAATCATCTTTCTAACAAATTGAGATATATTGAATTGAGTTATTATCCTTTCATGTATTTGCCATCAAGTTTTCAGCCCAATCAACTTGTTGAGTTGAGATTGAAGTGTAGCAGCATCAAACAACTCTGGGAAGGCAAGAAGAATCTGCCCAAATTGAGAATTTTGGATCTGAGCTACTCCGAGAATCTAATAAAGATACCAGATTTTGGAGAGTTCCCAAATCTCGAGCGGCTAAATCTAAAAGGATGTATACAACTTGTGCAGTTGGATCCATCTATTGGGCTTCTAAAAAAGATTGTTTACTTGAATTTAAGATATTGCCGAAGTTTAGTAAGCATACCCAACAACATATTTGGTCTCAGGTCTCTTATAGTTCTAAAAATGCATGGGTGTTCTGGGTGTTGGTTCAAAGAGTTTAACAACACAAGGCATTTGGATATAAGTGAAAGTGCTTCACATTCCCAATCAATGTCCTCCATCTGCAAATGGACCCCAAAGCCTTACCATTCCTTGCTTCCCACTCCCACAACAAACACTGTTATGTTTCCTTCCTTGCTTAGCATATATTGTTTACGTGAAGTTGATATTAGCTGTTGTGGTTTAAGCCAACTCCCTGAGGCTATTGGATGTTTACGTTGGTTAGAAATGTTAAATCTTGGGGGGAACAATTTTGTGACACTGCCTAGCCTTAGGGAGCTTTCCAAACTTGTACATTTGAACTTGGAGGACTGCAAGCGGTTGGAATCTTTGCCCGAGCTTCCTTTCCCTTCTACTATCGAGCAGGATCTTCGAAAGAACAGATATTGGAAGAGAGCAGGATTGTTCATTTTCAACTGTCCTAAAATAAGTGATACGGAAAGATGCAGTAGAATGACATTCTCATGGATGACACAATTCATTCAAATGAACAACGAACGCCCTGCCTTCTTTAACATTGGTATTGTCAGTCCAGGAAGTGAAATACCAAGTTTGTTCAACAATCAGAGCGTTGATAGTTCAATTCCCGTATCTCCTGTTATGAGGGACAAGGGCAATAATATCGTTGGCTTTTTATGTTGTGCAGTATTTTCTTTAGCGCATTGTTATCCAACAACGACAAGATCTTCGGCCCGGTTGGAACTGTATGCATTAAACAACATTGTCTTTCTTCCGGTAAATTTAGATGGAAATCTTATTACTGTCGCATCAAATCACATCTGGCTAATCTATTTCCCTTGGAAGTCATCTTATGATGATTTGTATGCTCCTTTCCATGTTAAAACTAAATGCGTTGGAGGCTTGGATGTGGAGGTGAAGAAATGCGGGTATCGATAA 1965 0.3954 MASSSRNSSISALRNSKYDVFVSFRGEDTRNNFTDFLFQAFQTQGIFVFRDDTNLPKGESIAPELLHAIQHSQIFVVVFSTNYASSTWCLQELDQIRECLQLSGKHVLPVFYDVDPSEVRHQKGSYAEAFSKHGQRFQHDSQMVSRWREALTQVANLSGWDLRHKPQSAAIKEIVQKIINILDCQSSCVSKDLVVIFEDFSNLRLLIVHEMNASRSLNHLSNKLRYIELSYYPFMYLPSSFQPNQLVELRLKCSSIKQLWEGKKNLPKLRILDLSYSENLIKIPDFGEFPNLERLNLKGCIQLVQLDPSIGLLKKIVYLNLRYCRSLVSIPNNIFGLRSLIVLKMHGCSGCWFKEFNNTRHLDISESASHSQSMSSICKWTPKPYHSLLPTPTTNTVMFPSLLSIYCLREVDISCCGLSQLPEAIGCLRWLEMLNLGGNNFVTLPSLRELSKLVHLNLEDCKRLESLPELPFPSTIEQDLRKNRYWKRAGLFIFNCPKISDTERCSRMTFSWMTQFIQMNNERPAFFNIGIVSPGSEIPSLFNNQSVDSSIPVSPVMRDKGNNIVGFLCCAVFSLAHCYPTTTRSSARLELYALNNIVFLPVNLDGNLITVASNHIWLIYFPWKSSYDDLYAPFHVKTKCVGGLDVEVKKCGYR* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2822 654 Gene3D Ribonuclease Inhibitor 392 490 IPR032675 -
Psa7g2822 654 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Psa7g2822 654 ProSiteProfiles Leucine-rich repeat profile. 430 451 IPR001611 GO:0005515
Psa7g2822 654 Gene3D Ribonuclease Inhibitor 187 391 IPR032675 -
Psa7g2822 654 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 14 188 - -
Psa7g2822 654 PANTHER TMV RESISTANCE PROTEIN N-LIKE 14 188 - -
Psa7g2822 654 Pfam Leucine Rich Repeat 245 264 IPR011713 -
Psa7g2822 654 SUPERFAMILY L domain-like 182 485 - -
Psa7g2822 654 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 160 IPR035897 -
Psa7g2822 654 Gene3D - 12 186 IPR035897 -
Psa7g2822 654 SMART till_3 17 157 IPR000157 GO:0007165
Psa7g2822 654 Pfam TIR domain 17 180 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2822 Psa-Chr7 201928774 201932236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2822 196 463 WRKY Transcription Factor Family AT4G12020 34.459 7.45e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2822 - - mtr:MTR_6g488300 449.514