Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2816 ATGAGGATGAAAAATAAAATACATCCACATGAAGAAGTTGATAATGTAATTCCTACCGAAGATTACTCACCTGACTTATCTTTAATCTCAACCAATGGTTCTATGAAAGATTCAGTTGAGGGTGGAAATTATATTCAGGAAGTAGGTCAGGTTGAGGCAAACATTGAAGTTCCTGATAGTGAAATGCAATCTTTAGCTGTAATGGATAGAAATCAAATTCATAGATGGAATGATGAGGTTTTTCGTATACAAGAGCTCGTTTTAGATAGGATAGAGAATAAGATGACCATTAATGTTTCAAACATCAGTTCCTATACAGCAAAATCTGATGAGCGGAATGCTAGTAATCAAATCAGTCGGAGTAGTCTCATAATGCCATTTCAGGACCTAACCGATAAACAGTTGAATCCTCCAAGCTTGAAAAGGAAGAGGAATGATCAGATTCATCTCGATGCTTCTTTCTTAACACATGAAAATCAGGAGGAAAGTGCTGATTTCTATCAGAGTATCCCGAAAAAGAAGATGAAAATGTACCACAACTCAAATCCAACAGGGGGAGGAGGGGCATGCAATAACTGTAAATGTAAAAGATCACAGTGCTTGAAACTTTATTGTTCGTGCTTTGCTGCTGGAGTTTACTGCACAGGACCTTGCTCATGTCAAAACTGCTTGAATAATCACATTAATGAAGATAAATTGCTACAATTGGTGGTTTTGTTTTGA 723 0.3665 MRMKNKIHPHEEVDNVIPTEDYSPDLSLISTNGSMKDSVEGGNYIQEVGQVEANIEVPDSEMQSLAVMDRNQIHRWNDEVFRIQELVLDRIENKMTINVSNISSYTAKSDERNASNQISRSSLIMPFQDLTDKQLNPPSLKRKRNDQIHLDASFLTHENQEESADFYQSIPKKKMKMYHNSNPTGGGGACNNCKCKRSQCLKLYCSCFAAGVYCTGPCSCQNCLNNHINEDKLLQLVVLF* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2816 240 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 191 226 IPR005172 -
Psa7g2816 240 ProSiteProfiles CRC domain profile. 189 240 IPR005172 -
Psa7g2816 240 SMART CXC_2 188 229 IPR033467 -
Psa7g2816 240 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 113 235 - -
Psa7g2816 240 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 113 235 IPR044522 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2816 Psa-Chr7 201624785 201625861 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2816 193 238 CPP Transcription Factor Family AT3G22780 39.130 1.39e-06 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Psa7g2816 TCR 1.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2816 - - mtr:MTR_1g103230 120.553