Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2814 ATGGTTTCCCGGGAAAACAACAATTGGCTTTTCGATTACGGCTTAATCGACGATATTTCCCCTCCCATTTCCACCTTCATGCCCACCCCTTCCCCCGGCTTCACCTGGCCCACACACCAGCCATTCAATGTTTCTTCCAATGTCGGTGCTGAAGTTGATGTCTCGTTAGGGGATTCTGACAGTCTCAAAGAGTCTGGTTCAAAGAAGAGGGGTAGATCTGAGTCATGTGCTGCCACTAGCTCCAAGGCATGTCGGGAGAAGTTGCGTAGAGATAGGCTTAATGACAAGTTTATTGAATTGGGCTCCATTTTGGAGCCTGGAAGGCCTGCCAAAACAGACAAGGCTGCTATCCTGATGGATGCTGTCCGAATGGTGACACAGTTGAAGGGTGAAGCCGAAAAGTTGAAAGATGCTAATACGGGTCTTCAAGAAAAGATTAAAGAATTGAAGGTTGAGAAGAATGAACTCCGTGACGAGAAACAGAGGCTCAAGGCAGAGAAAGAGAAGTTGGAGCAGCAGCTGAAATCTATGAATGCACAACCCAGTTTCTTGCCTCCCCCCACTGCACTCCCTGCTGCACTACCTGCTGGATTTGCTGCACAAGGCCAAGCCCATGGCAACAAGTTGGTACCTTTTATTAGTTATCCAGGAGTTGCAATGTGGCAATTTATGCCACCTGCTGCAGTGGATACCTCACAGGATCATGTACTTCGTCCTCCAGTTGCCTAA 729 0.4829 MVSRENNNWLFDYGLIDDISPPISTFMPTPSPGFTWPTHQPFNVSSNVGAEVDVSLGDSDSLKESGSKKRGRSESCAATSSKACREKLRRDRLNDKFIELGSILEPGRPAKTDKAAILMDAVRMVTQLKGEAEKLKDANTGLQEKIKELKVEKNELRDEKQRLKAEKEKLEQQLKSMNAQPSFLPPPTALPAALPAGFAAQGQAHGNKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRPPVA* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2814 242 Gene3D - 78 154 IPR036638 GO:0046983
Psa7g2814 242 PANTHER BHLH TRANSCRIPTION FACTOR 1 242 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Psa7g2814 242 CDD bHLH_AtILR3_like 82 157 - -
Psa7g2814 242 Pfam Helix-loop-helix DNA-binding domain 81 128 IPR011598 GO:0046983
Psa7g2814 242 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 147 IPR036638 GO:0046983
Psa7g2814 242 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 77 128 IPR011598 GO:0046983
Psa7g2814 242 PANTHER TRANSCRIPTION FACTOR ILR3 1 242 - -
Psa7g2814 242 Coils Coil 118 180 - -
Psa7g2814 242 CDD bZIP 143 175 - -
Psa7g2814 242 SMART finulus 83 134 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2814 Psa-Chr7 201597666 201601874 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2814 1 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 71.605 8.04e-117 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Psa7g2814 HLH 3.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2814 - - gmx:100788858 363.614