Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2803 ATGGGGGGTTGCACTTCGAAGCCGCAGAAACCCAACCCATATGCCGTTAGAGAAACGGAAGCTGACCCAACGCAAATCCCGAAAACCCCGCTAAGTCCCGTCGCCGATAGTCATGGCCGGAAAGATAAAGATGACGTCATCGCCGGGAAAAAGTCTCCGTTTTTTCCGTTTTACAGTCCGAGCCCGGCTCGTTTTTTGAAGAAGTCTCCTTCGACTCCGAGCCGGAGTACGAGCTCGACGCCGAGGAGGTTTTTCCGGAGACCTTTTCCTCCGCCTTCCCCGGCGAAGCATATAAGGGCTGTGTTGGCTCGGAGACAAGGGAAGAAGGAAACTGCGGCGATACCGGAAGATTCGGAGGAGGCTGCAGGGGATTTGGACAAGAGATTTGGATTCTCGAAGGATTTTACTAGTAAGTTGGAGGTTGGAGAAGAAGTTGGTAGAGGGCATTTTGGGTATACTTGTTCTGCTAAGTTCAAGAAGGGTGAGCATAAGGGTCAACAAGTAGCTGTAAAAGTCATTCCTAAAGCAAAGATGACAACAGCAATTGCAATTGAAGATGTAAGAAGGGAGGTGAAAATATTGCGAGCTTTAAACGGGCACAGCAATTTGGTACAATTCTATGATTCATTTGAAGACCAAGAAAATGTCTACATTGTCATGGAGTTATGTGAAGGGGGAGAGCTATTAGATATGATACTATCAAGAGGAGGGAAATACTCAGAAGATGATGCGAAGGCTGTCATGGTACAAATACTAAATGTTGTTGCATTTTGTCATCTTCAGGGTGTGGTGCATCGAGATCTTAAGCCCGAGAATTTTTTGTACACTTCAAAAGACGAAAGTTCCGAGTTAAAAGCTATAGACTTTGGATTATCAGATTTTGTCAGACCAGATGAGAGGCTTAATGACATTGTTGGAAGTGCTTATTATGTGGCTCCTGAAGTTCTTCATAGATCTTACAGCACAGAAGCTGATGTGTGGAGTATAGGTGTGATAGCATATATTCTATTATGCGGTAGTCGTCCATTTTGGGCTAGAACAGAATCGGGTATTTTTAGGGCCGTTTTGAAAGCTGATCCAGGCTTTGAAGAAGTTCCTTGGCCATCCTTATCTTCAGAAGCAAAAGATTTTGTCAAACGCCTACTGAATAAGGACCCACGGAAACGAATATCTGCTGCTCAGGCACTGGGTCATCCTTGGATTCGTAATTACAATGATGTAAAAGTTCCACTTGATATTTTAATATTCAAGCTCATGAAGACTTATATGAGATCATCATCTTTGCGCAAAGCTGCCTTAAGGGCCTTGTCAAAGACATTAACTGCTGATGAACTCTATTATCTAAGGGAACAGTTTGCACTGTTGGAACCAAGCAAAAATGGCAGCATATCCTTGGAGAACATTAACAAGGCCTTGAAGAAATATGCAACAGATGCCATGAAAGAGTCTCGTATCACTGATTTTCTTTCCTCGCTGACTTCATTACAATATAGAAGAATGGATTTTGAAGAATTTTCTGCCGCTGCGTTAAGTGTGCATCAACTCGAAGCTCTTGATCGTTGGGAACAACATGCCCGCTGTGCATATGAACTTTTTGAGAAAGACGGAAACAGGGCTATTGTCATTGAAGAACTTGCTTCAGAACTAGGCCTTGGTCCATCTATCCCTGTTCATGTTGTTCTTCATGACTGGATACGCCACACCGATGGGAAGTTAAGCTTTCTCGGGTTCGTCAAATTATTGCATGGTGTATCTAGCCGAAGCATTGCAAAGGTCCAGTAA 1782 0.4366 MGGCTSKPQKPNPYAVRETEADPTQIPKTPLSPVADSHGRKDKDDVIAGKKSPFFPFYSPSPARFLKKSPSTPSRSTSSTPRRFFRRPFPPPSPAKHIRAVLARRQGKKETAAIPEDSEEAAGDLDKRFGFSKDFTSKLEVGEEVGRGHFGYTCSAKFKKGEHKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALNGHSNLVQFYDSFEDQENVYIVMELCEGGELLDMILSRGGKYSEDDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLYTSKDESSELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPGFEEVPWPSLSSEAKDFVKRLLNKDPRKRISAAQALGHPWIRNYNDVKVPLDILIFKLMKTYMRSSSLRKAALRALSKTLTADELYYLREQFALLEPSKNGSISLENINKALKKYATDAMKESRITDFLSSLTSLQYRRMDFEEFSAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSIPVHVVLHDWIRHTDGKLSFLGFVKLLHGVSSRSIAKVQ* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2803 593 ProSitePatterns Protein kinases ATP-binding region signature. 145 171 IPR017441 GO:0005524
Psa7g2803 593 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Psa7g2803 593 ProSiteProfiles Protein kinase domain profile. 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2803 593 PANTHER CDPK-RELATED KINASE 2 40 587 - -
Psa7g2803 593 MobiDBLite consensus disorder prediction 65 96 - -
Psa7g2803 593 SUPERFAMILY EF-hand 432 582 IPR011992 -
Psa7g2803 593 Gene3D Transferase(Phosphotransferase) domain 1 228 413 - -
Psa7g2803 593 Gene3D - 419 510 - -
Psa7g2803 593 MobiDBLite consensus disorder prediction 1 48 - -
Psa7g2803 593 SMART serkin_6 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2803 593 PANTHER SERINE/THREONINE-PROTEIN KINASE 40 587 - -
Psa7g2803 593 SUPERFAMILY Protein kinase-like (PK-like) 135 437 IPR011009 -
Psa7g2803 593 Gene3D Phosphorylase Kinase; domain 1 141 227 - -
Psa7g2803 593 Gene3D - 426 580 - -
Psa7g2803 593 MobiDBLite consensus disorder prediction 65 83 - -
Psa7g2803 593 CDD STKc_CAMK 140 400 - -
Psa7g2803 593 Pfam Protein kinase domain 140 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2803 Psa-Chr7 201169534 201174393 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2803 1 589 EF-hand Containing Proteins AT3G50530 72.943 0.0 925
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Psa7g2803 Pkinase 4.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2803 K00924 - gmx:100798913 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2803 7 201169534 201174393 Psa7g2803 7 201169534 201174393 ECH