Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2801 ATGGGGAGAAGAACCAGGTGCTTCTTAGACATTAGCATAGGAGAAGAACTTGAGGGAAGAATATTGGTAGAGCTTTACAACGATATTGTACCCAAAACTGCTGAGAATTTCAGAGCTCTATGCACTGGTGAAAAAGGTATTGGTCCCAATACTAGGCTGCCTCTCCATTTTAAGGGAACTTGCTTTCATCGGATTCTTAAAGGCTCTATGATCGAAGGAGGTGATATATCTGCCGGAGACGGGACGGGAGGAGAATCTATATATGGACTCAAGTTTGAAGATGAAAATTTTGAAATGAAGCATGAAAGGAAAGGGATGTTATCGATGGCAAACACCGGTCCTGATACAAATGGCTCTCAGTTTTTTATCTCTACTACCCGAACGCCTCATCTAGACGGTAAGCATGTTGTATTTGGGAAAATAGTTAAAGGAATGGGCGTAGTCCGTTCGATTGAGCACGTTACGACCGGAGACGAGGACCGTCCTGTTCCTGATGTTAGAATTGTGGATTGTGGAGAAATTCCTGAAGGAGATGATGATGGTATAACTAACTTTTTTAAAGACGGCGATACTTATCCCGATTGGCCAGCAGACCTTGCCGAGACTCCTAGTGAACTTGAATGGTGGTTGAAATCTGTTAACGCAATCAAAGCTTTTGGTAATGAGTATTACAAGAAACAAGACTACAAAATGGCTCTAAGAAAGTATCGAAAGGCTTTACGTTACCTGGATATTTGTTGGGAGAAGGAAGGGATTGACGAAGAGAAAAGTTCATTTTTGAGAAAAACAAAATCTCAGATATTTACAAACAACTCTGCTTGTAAATTGAAATTAGGCGATATTAAAGGAGCGTTGTTGGACACAGAATTTGCGATGCGTGAAGGTAATAATAATGCCAAAGCTTTATTCCGCCAAGGACAGGCATACATGGTACTCCACGACATTGATGCTGCAGTTGAAAGCTTTAAAAAGGCACTGACCTTGGAACCAAATGATGCTGGAATAAAAAAGGAACTCGCTGCTGTGAGGAAGAAGATTTTGGATAGGACTGATCTAGAGAAAAAAGCATATAGTAAGATGTTCCAAAAACACAAAGGTTTGTGTTGA 1107 0.4074 MGRRTRCFLDISIGEELEGRILVELYNDIVPKTAENFRALCTGEKGIGPNTRLPLHFKGTCFHRILKGSMIEGGDISAGDGTGGESIYGLKFEDENFEMKHERKGMLSMANTGPDTNGSQFFISTTRTPHLDGKHVVFGKIVKGMGVVRSIEHVTTGDEDRPVPDVRIVDCGEIPEGDDDGITNFFKDGDTYPDWPADLAETPSELEWWLKSVNAIKAFGNEYYKKQDYKMALRKYRKALRYLDICWEKEGIDEEKSSFLRKTKSQIFTNNSACKLKLGDIKGALLDTEFAMREGNNNAKALFRQGQAYMVLHDIDAAVESFKKALTLEPNDAGIKKELAAVRKKILDRTDLEKKAYSKMFQKHKGLC* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2801 368 SUPERFAMILY Cyclophilin-like 4 174 IPR029000 -
Psa7g2801 368 SUPERFAMILY TPR-like 207 362 IPR011990 GO:0005515
Psa7g2801 368 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 25 40 IPR002130 GO:0000413|GO:0003755
Psa7g2801 368 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 62 74 IPR002130 GO:0000413|GO:0003755
Psa7g2801 368 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 105 120 IPR002130 GO:0000413|GO:0003755
Psa7g2801 368 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Psa7g2801 368 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 133 148 IPR002130 GO:0000413|GO:0003755
Psa7g2801 368 Pfam Tetratricopeptide repeat 299 332 IPR001440 GO:0005515
Psa7g2801 368 ProSiteProfiles TPR repeat profile. 299 332 IPR019734 GO:0005515
Psa7g2801 368 SMART tpr_5 299 332 IPR019734 GO:0005515
Psa7g2801 368 SMART tpr_5 213 246 IPR019734 GO:0005515
Psa7g2801 368 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP40 3 362 - -
Psa7g2801 368 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 8 173 IPR002130 GO:0000413|GO:0003755
Psa7g2801 368 Gene3D - 1 180 IPR029000 -
Psa7g2801 368 Gene3D Tetratricopeptide repeat domain 207 363 IPR011990 GO:0005515
Psa7g2801 368 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 362 - -
Psa7g2801 368 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 9 172 IPR002130 GO:0000413|GO:0003755
Psa7g2801 368 ProSiteProfiles TPR repeat region circular profile. 299 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2801 Psa-Chr7 201095240 201098204 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2801 15 171 U-box Gene Family AT5G67530 40.506 6.58e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2801 K05864 - gmx:100804110 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2801 7 201095240 201098204 Psa7g2801 7 201095240 201098204 ECH