Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2796 ATGACGGTCGATGGTTCGTGTTTTGTTGAATGGAAAGAACAATTTGTTTCACAAGAGCGCGGCCATCGTGTGGTTCACTATTACCTAAAGGATTCTGCTGGAGAATCATTCCTTGCAGTTGTTGGCACCGAGAGGAGTGTTAGACACATGTGCTACGTTATTGCTGAGGATTTCCTTGAAATCTGCGGAATGGAGGGTTCCTTTCCACCGGGTTTTAAATGGAGATCTAGAAGAGAGGTGGTCGATTGGCTGACATCGATGTTATCAAAGCAGCATCTGCAGGGCGATAGAAGTGTAAGGCCTGCTCATAATTTGGAACTAGCTCATGAGATCACAAATGGTGATGTTAAAGAAGTTACCGGTCTTTCTGCACAAATGGTGGATGACAAGGACATTCCAAAGAGTAACTACAAAATATCCAATTCTGACATCGTTTGGTCGGGACTTGCGTGGACATGTGGCAAACAACTCAAGCATTATCCCGCTTTTTGCAGGAATGGCATCCAAATAGGGATTCAGTCCTTTGTTTTTGTCATGGGCAACGGAGAGAACCATTATGTTGCATATTTAGACGATATGTACGAAGACAGAAGGGGGCAGAAAAAGGTAAAAGTACGGTGGTTTCATCATAATCAGGAAGTCAAGGGTGCAATTCCCGTACGAAATCCTCACCCTCGTGAAGTTTTCATCACATCGTATTCTCAAGTCATCAGTGCAGAGTGTGTTGACGGACCTGCCACAGTTTTGACCCGTGAACACTACGAAAAATGCACACCTTATTTTTCACCCCCTTCAATAGACAGAATACATTTGTGCTTTAGGCAATTAAAAGGCAACAAAGTCAAGCCCTTCGACTTAAGTAAACTGCGTGGCTACTATACTCAGCCAGCTCTTTCTTCCTTGCAAGTTGATAGTATCCACAACGCGGAGGCTCACAGCAACAGCCTCACAGGAGAAGATGAAGATTTGGATGTCGGCAACGATACAAAGCGCGGAGCCAAGAGGAGTAGAAGCGTTAAGGATTCTCCTCCTTCTTGTAACGGTCGACAAGGGGTTAGGAAGTTGATTAGAAGTAATCAAATAATGGGATATCAAACTTTCCAGGTTGTGAATTATGTGAGGCCAGATAGGAGATTGCTTTCTCTAAAACCGATTGAATGTCAACATTGGTATAACCCGATTTACAAGGTTGATGACAAGATAGAGTTGCTCTGTCAAGATAGTGGCATCCGAGGCTGCTGGTTTAGATGTACGATTTTACAGGTTGCTCGGAAAAAGCTGAAAGTCCTATATGATGATGTTCAGGATGAAGATGGAAGTGGAAATCTTGAGGAGTGGATCCCTGCTTTTAAGTTGGCCAAGCCTGATAAACTTGGGATGAGACAACCTGGCCGATTGACGATAAGGCCAGCTCCACCTTTTGAAGAACAAGAAGTGATTGTTGAGGTCGGAACTGCCGTTGATGCATGGTGGAGTGATGGGTGGTGGGAGGGTGTTGTAACTACAATTGAGAACTGTGGCGATAACAGTGTTCAAGTCTACTTTCCTGGTGAAAGCTTGCAAATGACAGTGCATAAAAAGGATTTAAGAATATCTCGAGATTGGTTCGATGACACGTGGATTAGTATAAAGGCAAAGCCTGATATAACCCCAACTATATTAACTTCTGATAGCTTTAACACAAGTCTCTCCATGTCTCCATCTATGGCTAAAGACGTAGACTCTGTTGGTTTTGCTAATTCATGTCACGACATTCCTGCTAGTGAGAAGTCTAACGAACTCGATATTTTTGAAGAGAAACTTGTATGCTGCGATGTTGCTGAAGATGAGATTTGTCTCCAAAATGATAATTCTCCTTCAGAAAAAAATACTCAAGTTGTCGATATCGAAGATAAGGGTTGTAATGATGATAAAGACAACAGTGAGAATGATGATAACAAGCATGATTATAGTGACAGTAGGGATGTGGAGGTGATTGAGACTTCTGGAGTTGACTTTAAAGGTGCACAACTAATGGAAGTTGCAGTGTGA 2031 0.4274 MTVDGSCFVEWKEQFVSQERGHRVVHYYLKDSAGESFLAVVGTERSVRHMCYVIAEDFLEICGMEGSFPPGFKWRSRREVVDWLTSMLSKQHLQGDRSVRPAHNLELAHEITNGDVKEVTGLSAQMVDDKDIPKSNYKISNSDIVWSGLAWTCGKQLKHYPAFCRNGIQIGIQSFVFVMGNGENHYVAYLDDMYEDRRGQKKVKVRWFHHNQEVKGAIPVRNPHPREVFITSYSQVISAECVDGPATVLTREHYEKCTPYFSPPSIDRIHLCFRQLKGNKVKPFDLSKLRGYYTQPALSSLQVDSIHNAEAHSNSLTGEDEDLDVGNDTKRGAKRSRSVKDSPPSCNGRQGVRKLIRSNQIMGYQTFQVVNYVRPDRRLLSLKPIECQHWYNPIYKVDDKIELLCQDSGIRGCWFRCTILQVARKKLKVLYDDVQDEDGSGNLEEWIPAFKLAKPDKLGMRQPGRLTIRPAPPFEEQEVIVEVGTAVDAWWSDGWWEGVVTTIENCGDNSVQVYFPGESLQMTVHKKDLRISRDWFDDTWISIKAKPDITPTILTSDSFNTSLSMSPSMAKDVDSVGFANSCHDIPASEKSNELDIFEEKLVCCDVAEDEICLQNDNSPSEKNTQVVDIEDKGCNDDKDNSENDDNKHDYSDSRDVEVIETSGVDFKGAQLMEVAV* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2796 676 Pfam Agenet domain 398 473 IPR008395 -
Psa7g2796 676 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 4 653 - -
Psa7g2796 676 PANTHER OS07G0607300 PROTEIN 4 653 - -
Psa7g2796 676 ProSiteProfiles BAH domain profile. 168 287 IPR001025 GO:0003682
Psa7g2796 676 MobiDBLite consensus disorder prediction 314 338 - -
Psa7g2796 676 MobiDBLite consensus disorder prediction 617 655 - -
Psa7g2796 676 Pfam BAH domain 174 261 IPR001025 GO:0003682
Psa7g2796 676 SMART BAH_4 168 277 IPR001025 GO:0003682
Psa7g2796 676 Gene3D - 136 280 IPR043151 -
Psa7g2796 676 SMART agenet_At_2 479 537 IPR014002 -
Psa7g2796 676 SMART agenet_At_2 393 458 IPR014002 -
Psa7g2796 676 MobiDBLite consensus disorder prediction 625 655 - -
Psa7g2796 676 MobiDBLite consensus disorder prediction 312 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2796 Psa-Chr7 200139095 200143362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2796 407 540 PHD Transcription Factor Family AT5G58610 30.000 1.43e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2796 - - mtr:MTR_3g058500 1148.65