Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2768 ATGATAGCTAGTTCCTTCTGCAATGCTGATTCTATGTTTTTAAGTGAAGAGGGGATAGATGTTAGAAAGATGATGGAACATAAAAGGAGCATTTGCTCTGTTGATCAAAGCAATTATAATTCAATTGCATCTAAAAAGCAAAAGCCTGATTTATCGATCACCACTAAGGATAGAAAGGAAAAGATTGGCGAACGAATTGTTGCTCTTCAACAGCTTGTTTCACCATATGGAAAGACAGATACGTCTTCTGTTCTAAAGGAGGCAATGGAATACATAGGGTTCCTTCATAAACAAGTTAAGCTGCTTAGTGCTCCTTACCTCGAAACTACACCAGCAATCCAGATGCAGGATACAGAGTCATGCAGCCTTAGGAGTAGAGGGTTATGTCTTGTTCCTGTCTCATTTACTACTGGAGTTGCTGAGGGCAATGGTGCAGACATTTGGGCTCCGATCAAGACCACTTCGCCCGGTTCTGAGAAAGATGTTTCTCAAATTCAGTGA 501 0.4092 MIASSFCNADSMFLSEEGIDVRKMMEHKRSICSVDQSNYNSIASKKQKPDLSITTKDRKEKIGERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKLLSAPYLETTPAIQMQDTESCSLRSRGLCLVPVSFTTGVAEGNGADIWAPIKTTSPGSEKDVSQIQ* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2768 166 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
Psa7g2768 166 PANTHER TRANSCRIPTION FACTOR BHLH154 24 146 - -
Psa7g2768 166 Gene3D - 43 117 IPR036638 GO:0046983
Psa7g2768 166 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Psa7g2768 166 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 54 113 IPR036638 GO:0046983
Psa7g2768 166 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 24 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2768 Psa-Chr7 197911958 197915267 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2768 24 153 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 59.231 3.16e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2768 - - gmx:100809747 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2768 7 197911958 197915267 Psa7g2768 7 197911958 197915267 ECH