Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2765 ATGTCCGTTTTCGTTGTAACCGCCATGGATTTCGCCGTCCTCGGTTTCCTGATTCCGTCTCTTTGGGAGATCGAAGTCGCGTTCGTTGCCTCCGTGTTCGTTATCCTTATTTATTGGTTCTTCACCTTCAGAACCGGTGACCGTAACTCCGATCGATCGCTTTCGGAGAATTCTGTTGCCGATGCCTCCGATGATAAGATTGGCCAGACCAGGGGAGATTCTCAAGCCAGTTCAGCATACCTAATTAAGTTAGAACTATTGGCTGCTAAAAATTTGATTGCTGCAAACTTAAATGGGACATCGGATCCTTATGCTATCATCACATGTGGCAATGAAAAGCGATTCAGTTCTATGGTCCCTGGTTCAAGAAATCCAATGTGGGGCGAGGAGTTCAATTTTAATGTCGATGAACTTCCTGTCCAGATCAATGTCACAATTTATGATTGGGATATAATTTGGAAAAGTGCTGTTCTTGGTTCAGTGACTGTTCCAGTTGAAAGTGAAGGTCAAACTGGTGCTGTGTGGCATACTCTGGATAGCCCATCAGGGCAGGTTTGCCTTCATATAAAAACACACAAGCTATCTGCAAATCCTACCAGGATAAATGGTTACGGCGGAGCCAACACTCGAAGAAGGATACCCTTGGAAAAACAGGGGCCAACAGTAGTCCATCAAAAGCCAGGACCTCTTCAAACGATATTTGAACTTCATCCAGATGAGGTTGTTGATCATAGTTACTCTTGTGCACTTGAGAGGTCATTCTTGTATCATGGTCGTATGTATGTGTCAACATGGCACATTTGTTTCCATTCCAATGTGTTCTCGAAGCAAATGAAGGTGGTTATTCCATTTGAAGATATAGATGAGATTCGAAGGAGTCAACATGCATTTATTAATCCTGCTATAACAATTATTCTTCGTATGGGTGCTGGTGGACATGGTGTCCCTCCTTTGGGAAGTCCTGATGGCAGAGTCAGATATAAGTTTGCATCATTTTGGAACAGAAATCATGCATTTAGAAATCTACAACGCGCAGCAAAGAACTTTTGTGAGAAGTTGGAAACTGAGAAGAAGGAAAACGCAGAGTCAGAATTGCGTGCGCATAGCAGTTCTGTCAGACAAAGTGCCGTAATGGATAAAGTTCCGGAAGCCAGCATGCCGAAAGTTGATAAACTTAAAACTTTCATCAAAGAAGAAGCTTTAGTTGGTATATACAATGATGTTTTCCCCTGCACAGCTGAGCAGTTTTTCAATTTATTGTTAAAGGATGATTCAAAGTTTACTAGCATGTATCGCTCAGTACGAAAGGATACTAATCTTGTGATGGGACAGTGGCATACAGCAGAAAAATATGATGGTCAAGTCCGAGAGATAACCTTCAGATCCCTTTGTAACAGCCCTATGTGCCCTCCTGACATAGCCATGACAGAGTGGCAACATGTTGTTCTATCACCAGACAAGAAACACCTGGTGTTTGAGACTGTGCAACAGGCGCATGATGTTCCATTTGGGTCCTATTTTGAGGTGCACTGTAAATGGAGTTTGGAGACAACCAATGGAAGTTCATGTGCTCTGGACATAAGAGTGGGTGCACATTTCAAGAAATGGTGTGTGATGCAATCCAAAATAAAGTCAGGGGCAGTCAATGAGTACAAAAAAGAAGTCGATGTGATGTTAGATGTTGCTCGTTCTTATATAAAGTCATATACTTCTGATGACGATAATGATAAGGTCTCTTCGTCCGCTGTGATGCCTTTGGAAAATTAA 1767 0.4233 MSVFVVTAMDFAVLGFLIPSLWEIEVAFVASVFVILIYWFFTFRTGDRNSDRSLSENSVADASDDKIGQTRGDSQASSAYLIKLELLAAKNLIAANLNGTSDPYAIITCGNEKRFSSMVPGSRNPMWGEEFNFNVDELPVQINVTIYDWDIIWKSAVLGSVTVPVESEGQTGAVWHTLDSPSGQVCLHIKTHKLSANPTRINGYGGANTRRRIPLEKQGPTVVHQKPGPLQTIFELHPDEVVDHSYSCALERSFLYHGRMYVSTWHICFHSNVFSKQMKVVIPFEDIDEIRRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFWNRNHAFRNLQRAAKNFCEKLETEKKENAESELRAHSSSVRQSAVMDKVPEASMPKVDKLKTFIKEEALVGIYNDVFPCTAEQFFNLLLKDDSKFTSMYRSVRKDTNLVMGQWHTAEKYDGQVREITFRSLCNSPMCPPDIAMTEWQHVVLSPDKKHLVFETVQQAHDVPFGSYFEVHCKWSLETTNGSSCALDIRVGAHFKKWCVMQSKIKSGAVNEYKKEVDVMLDVARSYIKSYTSDDDNDKVSSSAVMPLEN* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2765 588 SMART C2_3c 81 177 IPR000008 -
Psa7g2765 588 Coils Coil 339 359 - -
Psa7g2765 588 ProSiteProfiles VASt domain profile. 400 570 IPR031968 -
Psa7g2765 588 PRINTS C2 domain signature 97 109 IPR000008 -
Psa7g2765 588 PRINTS C2 domain signature 121 134 IPR000008 -
Psa7g2765 588 PRINTS C2 domain signature 142 150 IPR000008 -
Psa7g2765 588 Pfam GRAM domain 231 299 IPR004182 -
Psa7g2765 588 SMART gram2001c 228 294 IPR004182 -
Psa7g2765 588 PANTHER BAG-ASSOCIATED GRAM PROTEIN 1 11 581 IPR044655 -
Psa7g2765 588 ProSiteProfiles C2 domain profile. 63 178 IPR000008 -
Psa7g2765 588 Pfam VAD1 Analog of StAR-related lipid transfer domain 404 549 IPR031968 -
Psa7g2765 588 Gene3D - 229 348 IPR011993 -
Psa7g2765 588 Gene3D C2 domain 63 192 IPR035892 -
Psa7g2765 588 CDD C2 82 178 - -
Psa7g2765 588 Pfam C2 domain 83 177 IPR000008 -
Psa7g2765 588 PANTHER BAG-ASSOCIATED GRAM PROTEIN 1 11 581 - -
Psa7g2765 588 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 80 190 IPR035892 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2765 81 166 C2H2 Transcription Factor Family AT4G21160 24.419 4.61e-06 47.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2765 7 197884247 197895489 Psa7g2765 7 197884247 197895489 ECH