Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2759 ATGGGAAAGAAAGGGAGTTGGTTTTCAGCAATCAAGAGGGTTTTCACACACCACTCCAAGGGGAAGGATTCGGATAACAAAAGTTTAAAAGAGAAGAAGAAAGGTCCTGGGAAACTAAAGCATGGAGAGACGAATTCTTTCATACCGCTCTTCAGGGAGCCGAGCAGCATTGAGAAAATATTTGGCGACTTCGAAAGAGAGCAACAAGTGCTTGCAATTAGGCCTCCCACGCCTCCTGAGCGACCCAAAACACCGCCTTTTGTTCCTCCTCGAGTTGCTTCTCCTAGGCCTCCTTCTCCAAAGCCCCCTTCTCCAAGAGCTTCATCTCCGAAGGCTCCTTCTCCACGAGTCACATCTCCCAAAGCTGCATCTTCCCGGAACGTTCATCAGAACAAGGAGGTTAGCTACAGACCTGAGCCGACTTTACGGAACCAACAAGCCTCGGCTACTAAGATTCAGGCTTTTTACAGAGGTTATACGGCGAGGAGGAGTTTTCGAGCTCTTAAGGGTTTGGTAAGGCTTCAAGGAGTGGTGAGAGGACAGAATGTGAAGAGACAGACAGTTAGTGCCATGAAACACATGCAGCTGTTAGTGCGAGTTCAATCTCAGATTCAATCTAGAAGAATCCAGATGCTGGAAAACCAGGCGCGATATCAAGCTGAGTTCAAGAACGATAAGGACGCTGCGAGTACCTTTGGAAAACTGACTTTAGGACATGGTTCTGAGGCAGGTAACAATGAAGATTGGGATGATAGTTTATTGACAAAAGAGGAAGTAGATGCAAGGTTGCAAAGGAAAGTGGAAGCAATCATCAAAAGAGAGAGAACAATGGCGTTTGCATATTCACATCAGTTGTGGAAGGCCACACCGAAATCAACTCAAACGCCGGTGACAGATATGCGATCGAGTGGATTCCCGTGGTGGTGGAACTGGTTGGAAAGACAACTACCTGCAACATCAAATCCACAAGAAAAACAAGTCCTAAAGAATTTCCAACTCACGCCGCCAAGACCATATTCAGAACAAAAGACAAGTCCGAGACCTGGCTCAAGCACTCAAAGGCAACAGCATCATCCTTTTGCCTTCGATAACATGGATACATCCACTCCAAAATCGACAAAATCGACTATCTTTCCATCTTCCAAACCATCTAGAACTCCTCCATTTAGGACTCCCCAAGGAAACAGTTCAAGCATGATGTCGAAATATTCAAGGTCAAGAGCAGTAGGGTCCAGTTCACCTTTCGACGTGCCAATGAAAGACGACGATAGTCTCACAAGCTGTCCGCCATTTTCGGTTCCAAACTACATGGCTTCAACTGCTTCTGCTAAGGCGAAAGTACGCGCTAGTAGTAATCCAAGAGAAAGATTTGGTGGTGGTGGTAGTAGCGGTTGCGTAACTCCAACTCCAAGCAATGATTCAAAACGAAGAGTCTCATTTCCTTTGTCACAAGGAATAGGATCATTCAAATGGAACAAAGGGTCATTGTTCTCTAACAATAAGGATCCTCATGCCTCTCACAGGACACCAGATAAATATCAGGAATCTATCGGAAACGTGAGCGTGGATTCGACGATATCATTACCGGCAAGGGTCGGAAGAAAGCCTTTTACAAGATTTGTGTGA 1626 0.4576 MGKKGSWFSAIKRVFTHHSKGKDSDNKSLKEKKKGPGKLKHGETNSFIPLFREPSSIEKIFGDFEREQQVLAIRPPTPPERPKTPPFVPPRVASPRPPSPKPPSPRASSPKAPSPRVTSPKAASSRNVHQNKEVSYRPEPTLRNQQASATKIQAFYRGYTARRSFRALKGLVRLQGVVRGQNVKRQTVSAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKDAASTFGKLTLGHGSEAGNNEDWDDSLLTKEEVDARLQRKVEAIIKRERTMAFAYSHQLWKATPKSTQTPVTDMRSSGFPWWWNWLERQLPATSNPQEKQVLKNFQLTPPRPYSEQKTSPRPGSSTQRQQHHPFAFDNMDTSTPKSTKSTIFPSSKPSRTPPFRTPQGNSSSMMSKYSRSRAVGSSSPFDVPMKDDDSLTSCPPFSVPNYMASTASAKAKVRASSNPRERFGGGGSSGCVTPTPSNDSKRRVSFPLSQGIGSFKWNKGSLFSNNKDPHASHRTPDKYQESIGNVSVDSTISLPARVGRKPFTRFV* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2759 541 SMART iq_5 144 166 IPR000048 GO:0005515
Psa7g2759 541 MobiDBLite consensus disorder prediction 111 131 - -
Psa7g2759 541 MobiDBLite consensus disorder prediction 1 52 - -
Psa7g2759 541 PANTHER IQ-DOMAIN 5-RELATED 1 538 - -
Psa7g2759 541 MobiDBLite consensus disorder prediction 75 110 - -
Psa7g2759 541 Pfam IQ calmodulin-binding motif 147 166 IPR000048 GO:0005515
Psa7g2759 541 MobiDBLite consensus disorder prediction 331 414 - -
Psa7g2759 541 MobiDBLite consensus disorder prediction 16 40 - -
Psa7g2759 541 MobiDBLite consensus disorder prediction 68 146 - -
Psa7g2759 541 Pfam Protein of unknown function (DUF4005) 406 485 IPR025064 -
Psa7g2759 541 MobiDBLite consensus disorder prediction 331 411 - -
Psa7g2759 541 MobiDBLite consensus disorder prediction 447 477 - -
Psa7g2759 541 ProSiteProfiles IQ motif profile. 145 173 IPR000048 GO:0005515
Psa7g2759 541 PANTHER IQ-DOMAIN 13 1 538 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2759 1 540 IQD Protein Family AT3G59690 52.513 4.49e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2759 - - gmx:100807777 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2759 7 197397064 197400891 Psa7g2759 7 197397064 197400891 ECH