Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2740 ATGTGCACAATGTTATTAACCATACTCAGCATTCTCTTGTTTTCATCACGTGCTTGTGTTTCTTCTTACCACCACCACCACCATCACCGTCGTATCCTCCACCAACCACTCTATCCTTCTATCTCTCTTCCACCTACACAACCACCTTCCTCTTCACCTCAAACTCAACCCAAACCACAACAGCAACAACCTAAGCTTCCATTTTCTTCCATTTCTTCTTCTTCTTCTTCTCCTCCACTAAAGCCTTTCTTCCCTACTTTCCAATCTCCACCACTCCCTCCTTCTCCAACTTTCCTCGCCACTTTTCCTGCTAACATCTCCTCCTTACTCCTCCCACAGCCTCATCCCCAAACCCACACCCACCGCACCGCTGCTGCCGTCGTTATCTCCCTCTGTCTTTTCTCTATCACCATCCTCACCGTATCTGCTATCTTCGCCTTCTACCGTCGCCATCTCAACCACACTTCTTCCTTCACCACCGCAAACGACGACAATGCTTCCAGGTCTGACAGTCTCCGTTTATTCCCGCCGAACACCGCCTCTTCAGACGCCGTCGACGGGAAGCCTCACGATAAACCAACCTCCGGGTCTGAGATATTCCACCTCGGTACAGTAGCAAGCTCATACGACACAACCGTTACCGCAGAATCAACCTCTGGCAATGACGGTTTCTCGCCGCCGTACTGGCAACTCACAGACTCCCCGGAGCTTCATCCCTTACCTCGTCTACCACGTTACAATGTCACAACATGGACGAGTGAACTGAGCAAAGAAAAAGAAGAAGACAAAAAAACAGAAGATGAAGAAGAAGAAGAGTTTTATTCTCCGAAAGATTCTCCTTCTGGAAACAAACAACAAAGTCCTCCTCCTTCTTCTTCTTCACCGGTCGTTGCAGTTGCTGTTACTGCAACAAGCTCTCGTTCATTCAACGTTTTCCATTTTGATAAATTTGGTAGCAGAAGCTTCACTTCAAGAACACCTTCTTACCCTCTTTCTTACTCACTTTCTCGTTCTCCTTCTCTCAATCTTAGTCCCATCCATAGCGTGAAATCTTTACCTCCTCACAACCCTGCATCCCCTTCTTTTTCTTCTTCCTCTTCGTCTCCAATCCGGTTTGAAGATTTTCGTTCAAATTGGGATGGTATGAATTCTCAGACAACCAAACTGTCTCATCCTGCTCCGCCGCCTATGCCGCCGAGGTTTTGGGAGACTCCGGTGGTGGCTTCTCAAAATGATAATGAGGAAACTCGAAAGCCAAAGTTGAAGGCTTTACATTGGGATAAAGTTAAGGCAAGCTCAGATAGGGCCATGGTTTGGGATCAGTTGAGACCAAGCTCTTTTCAGTTGAATGAGGACATGATTGAGACACTCTTTATGATAAATAATTCCAATGAAAATTCTGCTTTGGCTTCTAAAGATAAAGCGCGAAATCAAATATTCCATTCTTCTCCTATGCCACCGGAGAATCGGGTGCTTGATCCTAAGAAGTCTCAGAATATTGCCATTTTGCTTCGAGCACTGAATGTGACTATTGATGAAGTTTGTGAAGCCCTCAGGGAAGGAAATTGTGATACATTGGGAACAGAACTTCTAGAAAGCTTATTAAAGATGGCTCCAACCAAAGAGGAAGAAGCTAAGTTGAAGGAGTTTAAAGATGATTCACCCTTCAAGCTTGGCCCTGCGGAGAAATTTCTTAAAGTCATGCTTGATATACCTTTTGCATTCAACAGAGTTGATGCGATGCTCTACATTGCTAATTTTGATTCAGAATTAGAATACCTTAAGAAATCCTTTCATACTCTAGAGGTGGCTTGTGAGGAATTGAAGAATAGCAGAATGTTTATGAAGATACTTGAGGCGGTTCTGAGAACTGGAAATCGAATGAATGTTGGCACTGATCGTGGTGACGCACAAGCATTCAAACTGGACACGCTTTTGAAGTTAGTTGATATTAAGGGAACTGATAAAAAGACTACTCTTTTACATTTCGTTGTACACGAGATTGTCAGAACCGAGGGTTCTCATGCTGACTCTGTCAACAACCTTCAATATACACTTCAAGATGAGGTTGACTCCAGGAAGCTTGGACTGCAAGTTGTATCGGGTTTGAGCGGGGAGCTCGCTAACGTTAAAAAGGCTGCTGTTATGGATTCAGACACGCTGAGTAGTGATGTTGCTAAACTCGCCAACGGAATTGAAAAGGTTGTGCGGGTTGTAAAATTGAATGAAGAGTCACCTTTGAAAGAAACTAACCAAAAATTTTCTGAGGCAGTGAAAGGCTTCTTGGAGAGGGGGGAAGCTGAGATTTCAAGAATCACGGCACAAGAGAAAAATGCTCTCGCTTTAGTGAAGGAGATAACTGAGTATTTCCACGGTAATTCGGAAAAGGAAGAAGCTCATCCGTTTAGGATATTTACGGTTGTAAAAGATTTCCTCTCTATACTAGACAGTGTGTGCAGGCAAGTTGGGAAAGCAAATGAGAGGACTTTGGTCGGTTCACATCAATATGTAATGCCTGCAATCTCTACACTGCCACCAATTTTCCCCGAGTTTAGTGGTATGCAGCCATCCGATTCCTCAGAATCTGATTAG 2592 0.4429 MCTMLLTILSILLFSSRACVSSYHHHHHHRRILHQPLYPSISLPPTQPPSSSPQTQPKPQQQQPKLPFSSISSSSSSPPLKPFFPTFQSPPLPPSPTFLATFPANISSLLLPQPHPQTHTHRTAAAVVISLCLFSITILTVSAIFAFYRRHLNHTSSFTTANDDNASRSDSLRLFPPNTASSDAVDGKPHDKPTSGSEIFHLGTVASSYDTTVTAESTSGNDGFSPPYWQLTDSPELHPLPRLPRYNVTTWTSELSKEKEEDKKTEDEEEEEFYSPKDSPSGNKQQSPPPSSSSPVVAVAVTATSSRSFNVFHFDKFGSRSFTSRTPSYPLSYSLSRSPSLNLSPIHSVKSLPPHNPASPSFSSSSSSPIRFEDFRSNWDGMNSQTTKLSHPAPPPMPPRFWETPVVASQNDNEETRKPKLKALHWDKVKASSDRAMVWDQLRPSSFQLNEDMIETLFMINNSNENSALASKDKARNQIFHSSPMPPENRVLDPKKSQNIAILLRALNVTIDEVCEALREGNCDTLGTELLESLLKMAPTKEEEAKLKEFKDDSPFKLGPAEKFLKVMLDIPFAFNRVDAMLYIANFDSELEYLKKSFHTLEVACEELKNSRMFMKILEAVLRTGNRMNVGTDRGDAQAFKLDTLLKLVDIKGTDKKTTLLHFVVHEIVRTEGSHADSVNNLQYTLQDEVDSRKLGLQVVSGLSGELANVKKAAVMDSDTLSSDVAKLANGIEKVVRVVKLNEESPLKETNQKFSEAVKGFLERGEAEISRITAQEKNALALVKEITEYFHGNSEKEEAHPFRIFTVVKDFLSILDSVCRQVGKANERTLVGSHQYVMPAISTLPPIFPEFSGMQPSDSSESD* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2740 863 PANTHER FORMIN-LIKE PROTEIN 2 14 861 - -
Psa7g2740 863 MobiDBLite consensus disorder prediction 178 198 - -
Psa7g2740 863 PANTHER FORMIN-RELATED 14 861 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Psa7g2740 863 SUPERFAMILY Formin homology 2 domain (FH2 domain) 392 828 - -
Psa7g2740 863 Coils Coil 252 272 - -
Psa7g2740 863 ProSiteProfiles Formin homology-2 (FH2) domain profile. 411 841 IPR015425 -
Psa7g2740 863 MobiDBLite consensus disorder prediction 56 71 - -
Psa7g2740 863 MobiDBLite consensus disorder prediction 278 298 - -
Psa7g2740 863 SMART it6_source 411 830 IPR015425 -
Psa7g2740 863 MobiDBLite consensus disorder prediction 45 71 - -
Psa7g2740 863 MobiDBLite consensus disorder prediction 254 298 - -
Psa7g2740 863 Gene3D Formin, FH2 domain 419 832 IPR042201 -
Psa7g2740 863 Pfam Formin Homology 2 Domain 414 815 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2740 Psa-Chr7 196295460 196298385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2740 403 853 FH2 protein (formin) Gene Family AT3G25500 66.079 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2740 - - gmx:100786203 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2740 7 196295460 196298385 Psa7g2740 7 196295460 196298385 ECH