Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2718 ATGCATTTCTCTTTCATCACTCCTCAAACACTATCAAGAACTTGTTTGTCCTATTTATTCATCTCCTTGGTTTTACTTTTCATCAATGGCTATCAAGCTGAGATTACCAGTGGAGACAACAAAGTTATACCTATCGGTGCAATGATCGACGTTAATTCTCGAGTCGGGAAAGAACAAAGAGTAGCCATGGATATTGCAGCTCAAAATTATAATAACACTTCAAATACCTACAAGCTTGCTCTCCATTTTCAAGAGCTTACCAAGAATTCCTTAAGAGCCACTGAAGCTGAAGAGATGATTAAAAAGAAGGTGGAAGTGATTGTAGGGATGCGAACATGGACAGAAGCAGCTTCTGTCGCTGAATTACTACATGAAGCTGAAGTTGAAGTTCCTATCATATCCTTTGTAGCACCTACAGTTACTCCACCGTTGATGTCGATTCGATGGCCGTCTTTGGTGAGACTAGCTAACAATGGAACAGCATATGTAAAATGCATAGCAGATTTGGTTCATGTTTATAACTGGCGTAGCGTAGTAGCCATCTATGAAGATGATGCATATGGCGGTGATTCCGGGATGCTAGCAGTTCTTTCCGAGGCCCTTCAAGAGACTGATTCGACGATTGAATATCGTTTAGCTTTGCCATCGCTTAGTTATCTGAGTGATCCAGGAATGTTTATTCGCGACGAGCTGTTTAAGATAACTGAAAACACGCAATCTCGAGTATTCATTGTATTGCAATCATCGTTAGAAATGGCGATTCGTTTGTTTAAGGAAGCTTCGCAAATGGGACTAGTGGATGGAGATTCAGTTTGGATAATCTCCGAGAGCATAACAAATTTGCTGGATTCTGTCAATAAGTCTAGTATTTCTTATATGCAAGGAGCTTTAGGAATCAAGAACTACTACTCAGAAAACAGCAATGAGTATAAAGATTTCGAAGCTCGGTTTAGGCGAGCTTTTCGGGACAAGTATCCGGACGAAGATAACCGCGACCCGGGATTTTATGCTTTGCAAGCATATGATAGCATTCAAATGGTTGGACATGCAATAGACAGAATGGCCAGTGGCAATGGTAATCACAAAAGGACTTTGCTGCAAGAAATAGTCTCGACCAATTTTCTTGGTTTAACCGGAAAAATTCAGTTTGAATCAGAACAGCTTTTCCAGAATCCTACTTTGAGGATTGTAAATGTAGATGGGAAGAGTTACAGAGAATTAGACTATTGGACTCTAGAAAATGGATTCTTCACTAACATTTCAACAGAAGTAGGTAAAACTGGTGGTTCTAGGAATTCAGAAAGTTTAAGTAGTATAGTAATTTGGCCTGGAAAGTCGCATGGAGTTCCAAAGGGATGGAACCTTCCTACTAAACAAAAGCCATTGAGAATTGCAGTCCCTGGTAGAACTTCATTTTCGAAATTCGTCAAGGTTGATTATGATGACATTGATGAGCAAGGAAATCCAAAATGCAGTGGATTTTGCATTGACATTTTCGATAAGGTTTTGGAGCTTTTGGGTTATGATCTTCCACATGAGTACTATCCTATCAATGGAACCTATCCTGATCTGGTTCAACTTGTTTATAACAAGACTTATGACGGTGTCGTTGGCGACATGACCATTCTGGCAGAGAGATTGCAATATGTAGATTTTACCGTACCGTATGCAGAATCGGGACTGTCGATGATAGTTAAGGAAAAGTCTCAAGAATCGGCATGGATGTTTATGAAGCCCTTCACATGGCAATTGTGGGTGGCAACTGGTGCCATCTTGATTTATACAATGTCAGTAGTGTGGTACCTGGAGAAGGATCACAATCAAGAGTTTCAAGGCACTTGGAAAAACCAAATCAGCACTTCTTTTTGGTTTACTTTCTCCTCGCTATTCTTTGCTCACAGGGAGAAAATGCATAGCAATTTATCGCGTGTAGTGATGGTATCGTGGCTGTTTCTAGTTTTGATTCTTAATTCGAGCTACACTGCGAGTCTTTCTTCAATGCTCACAGTTCAACAACTGCAAACAAATGTCACAGACATTGAGTGGTTGAAGAAGAACAACATGAAAATTGGTTGTGATGGAGATTCGTTTGTCAGGACTTACCTAGAGCAAGTCGAAAAATTCAAGCCAGGGAACATAATAAATATTAGTAATGAAAACTATTATGACCCTGGATTCAAAAACTACTCAATTGCTGCAGCATTTCTCGAACTCCCTTACGAGAAAGTATACATCAGTAAATACTGCAAGGGGTACTCGGCTTCTACACCTACCACTAGATTTGGAGGACTTGGATTTATGTTCCAGAAAGGCTCCCCCTTGGCCAGAGATGTTTCTAAAGCTATTTTGCAGCTCTTAGAGAAGGGAGAATTGAGGAAGTTAGAAGATATATGGTTGAATCCCAAAGACGCGTGCTCCAACAGTTTGAACTCCGAGAGTACAGAAAGTTTGAAGCTGGGAAGTCTATGGATTCTCTATGTGATTTCTGGTTCCACTTCTACTATTTGTTTTATAGTTTCTGCCATCCATTCTCTAAAATCTAGTCAAACACCAAGTGATGACTCAGAAGAAATTAATGGCTCCAGAAGTTATGTGAACAGATGGAAAAGGGTGGTTAAATTAACTAGTAGTAAGATTTACAGCAAAAAGCCTAATAAAGCAAGCATTGTGAAGGAAGATGTTACTGATTGTCCTTCTAGTACCCCTGAGCATCAGCAGCAGGGAATGGCTCTTCAATTACCAGAAATCATAACAGTCTCTTCCCCACCAACACAGTAA 2778 0.4003 MHFSFITPQTLSRTCLSYLFISLVLLFINGYQAEITSGDNKVIPIGAMIDVNSRVGKEQRVAMDIAAQNYNNTSNTYKLALHFQELTKNSLRATEAEEMIKKKVEVIVGMRTWTEAASVAELLHEAEVEVPIISFVAPTVTPPLMSIRWPSLVRLANNGTAYVKCIADLVHVYNWRSVVAIYEDDAYGGDSGMLAVLSEALQETDSTIEYRLALPSLSYLSDPGMFIRDELFKITENTQSRVFIVLQSSLEMAIRLFKEASQMGLVDGDSVWIISESITNLLDSVNKSSISYMQGALGIKNYYSENSNEYKDFEARFRRAFRDKYPDEDNRDPGFYALQAYDSIQMVGHAIDRMASGNGNHKRTLLQEIVSTNFLGLTGKIQFESEQLFQNPTLRIVNVDGKSYRELDYWTLENGFFTNISTEVGKTGGSRNSESLSSIVIWPGKSHGVPKGWNLPTKQKPLRIAVPGRTSFSKFVKVDYDDIDEQGNPKCSGFCIDIFDKVLELLGYDLPHEYYPINGTYPDLVQLVYNKTYDGVVGDMTILAERLQYVDFTVPYAESGLSMIVKEKSQESAWMFMKPFTWQLWVATGAILIYTMSVVWYLEKDHNQEFQGTWKNQISTSFWFTFSSLFFAHREKMHSNLSRVVMVSWLFLVLILNSSYTASLSSMLTVQQLQTNVTDIEWLKKNNMKIGCDGDSFVRTYLEQVEKFKPGNIINISNENYYDPGFKNYSIAAAFLELPYEKVYISKYCKGYSASTPTTRFGGLGFMFQKGSPLARDVSKAILQLLEKGELRKLEDIWLNPKDACSNSLNSESTESLKLGSLWILYVISGSTSTICFIVSAIHSLKSSQTPSDDSEEINGSRSYVNRWKRVVKLTSSKIYSKKPNKASIVKEDVTDCPSSTPEHQQQGMALQLPEIITVSSPPTQ* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2718 925 Pfam Ligand-gated ion channel 801 829 IPR001320 GO:0015276|GO:0016020
Psa7g2718 925 Gene3D - 161 332 - -
Psa7g2718 925 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 23 902 - -
Psa7g2718 925 SMART GluR_14 463 801 IPR001320 GO:0015276|GO:0016020
Psa7g2718 925 Gene3D - 573 709 - -
Psa7g2718 925 SUPERFAMILY Periplasmic binding protein-like II 438 800 - -
Psa7g2718 925 SUPERFAMILY Periplasmic binding protein-like I 40 453 IPR028082 -
Psa7g2718 925 Gene3D - 722 803 - -
Psa7g2718 925 PIRSF IGluLR_plant 12 915 IPR017103 -
Psa7g2718 925 Gene3D - 338 465 - -
Psa7g2718 925 Pfam Bacterial extracellular solute-binding proteins, family 3 488 800 IPR001638 -
Psa7g2718 925 PANTHER GLUTAMATE RECEPTOR 3.4 23 902 - -
Psa7g2718 925 CDD GluR_Plant 460 799 - -
Psa7g2718 925 Gene3D - 470 572 - -
Psa7g2718 925 CDD PBP1_GABAb_receptor_plant 45 420 IPR044440 -
Psa7g2718 925 Pfam Receptor family ligand binding region 62 401 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2718 Psa-Chr7 194712443 194715699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2718 20 921 Ion Channels AT2G29120 32.874 5.21e-144 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2718 - - aprc:113859865 1248.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2718 7 194712443 194715699 Psa7g2718 7 194712443 194715699 ECH