Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2695 ATGTCTTCCTCCAACAAACATTGGCCTAGTATGTTCAAAAAATCTAAACCGGACAACCATCAGAATTGGCAGCATGGCGTGAACTCGACTCTCTTGTCCTCCGCTGGATTCCAAACAACTCCTGTTACTTTAGGTGCAGATGTTGATGACAGAAGTCCAGAACCGAAGCCAAGATGGAATCCAAAACCCGAACAAATTCGCATTTTGGAATCCATCTTCAACTCCGGAATGGTGAACCCTCCAAGGGAAGAGATCAAGAAGATTCGAGCTCAGTTACAAGAGTTTGGCCAAGTTGGTGACGCAAATGTCTTCTATTGGTTCCAAAACCGCAAATCTCGAAGCAAGAACAAGCATAGACAGCTCCACAGCAATCCAAGAAACAAAAAGAATTCTGCTGCGGCTGCTGTTGCTGCTCAAATCATCACTGCACCACCTAACTCATCCTCCTCATCTTCCTCCGATCAACCAAACGCCTCGACCAACGAAGCGATAATGGTTAACAATATTGGCTTGATCTCCAATGATGGGATGGGGGTGCTGCCTAATTCCACCACTGTGAACCAAAACCAAGCTGTTGCTTATAATTTTCTTCAAACAACACCTGCTGAGACCAATTTTCAACTACCTACACCCCCACCACCACCCTATTTCTCTTTCCCTGTGGAGAATAATAACAATATCAATGAAGGAGTAGCACAAGGGCTTTACTTATCTGATCAATATTCCAATATGGTTCAGCATTTACCTCCACAAAATGTTGCTCTTCCTTTGTTTAACCCTGAGATCATGATGAACTATGGAATTGGAAATTCCTCTATGAATAACCAGCATGATCAAGAGAATACTATTCAAGGGGGAGCAATGAATTTGATGCAGATGAACCAACAAAACCCACAACAACTTGCTTTTGGTCTCACTTCAAGAACGGATGATTCATCTGTTGTTCCGCTTCCTCCTGTTGCCACTAATCCACATCTTGCTGCTCCATTCCCCATCCCTCAATTTCAAGGTGGTGGTGAGGAAGATGATAAGCCAAAATGTAGGGTGATAATTAACAGCACTGTAGTCGAAGTTGAAGTGGGACCCTTCAATGTTCGTGCAAATTTTGGAGATGGTGCCGTTCTGTTTGACTCCTCCGGCCAACGAGTTCTCACCGACGAATGGGGTGTCACCCTCCACTCACTCCAACATGGTGCTTCTTATTACATGGTTTAA 1215 0.4412 MSSSNKHWPSMFKKSKPDNHQNWQHGVNSTLLSSAGFQTTPVTLGADVDDRSPEPKPRWNPKPEQIRILESIFNSGMVNPPREEIKKIRAQLQEFGQVGDANVFYWFQNRKSRSKNKHRQLHSNPRNKKNSAAAAVAAQIITAPPNSSSSSSSDQPNASTNEAIMVNNIGLISNDGMGVLPNSTTVNQNQAVAYNFLQTTPAETNFQLPTPPPPPYFSFPVENNNNINEGVAQGLYLSDQYSNMVQHLPPQNVALPLFNPEIMMNYGIGNSSMNNQHDQENTIQGGAMNLMQMNQQNPQQLAFGLTSRTDDSSVVPLPPVATNPHLAAPFPIPQFQGGGEEDDKPKCRVIINSTVVEVEVGPFNVRANFGDGAVLFDSSGQRVLTDEWGVTLHSLQHGASYYMV* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2695 404 CDD homeodomain 55 118 IPR001356 GO:0003677
Psa7g2695 404 Gene3D - 56 122 - -
Psa7g2695 404 MobiDBLite consensus disorder prediction 1 25 - -
Psa7g2695 404 MobiDBLite consensus disorder prediction 114 135 - -
Psa7g2695 404 ProSiteProfiles 'Homeobox' domain profile. 52 117 IPR001356 GO:0003677
Psa7g2695 404 SUPERFAMILY Homeodomain-like 52 121 IPR009057 -
Psa7g2695 404 Pfam Homeodomain 56 116 IPR001356 GO:0003677
Psa7g2695 404 SMART HOX_1 54 121 IPR001356 GO:0003677
Psa7g2695 404 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 404 IPR044557 GO:0003700|GO:0050793
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2695 Psa-Chr7 192091694 192095580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2695 1 404 Wox Gene Family AT2G33880 40.288 2.73e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Psa7g2695 Homeodomain 7.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2695 - - mtr:MTR_7g025010 379.793