Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2691 ATGGCTTTAATCTCACAACCAGAGTTACCTCTCGATGAAAACGATTCTCAAGACATGGTCATATACCAAATTCTTAAAGAAGGCAACGAACTCAGCAACACAATGGTGCAACAAAGGCACCAAAATGGCCTAGACCAGAACAAGGACATTAAAAAGAAGAAATACAGAGGCGTAAGGCGTCGACCGTGGGGGAAATATGCGGCGGAGATCCGTGACTCGGCGCGAAATGGAGCTAGGATATGGCTTGGTACATTTGAAACAGCTGAAGAAGCTGCAATTGCTTATGATAAAGCTGCTTTTAGAATGAGGGGTTCTAAGGCCTTGTTGAATTTTCCACATGAGTTTTCTGCTTCTCTGCAACTGAGTTCAACCTCTAAGCATGGTTTGAGCTCAGGGAAAATCAACAATAAAAACTCTGAGTCAAGTGCTAGTAACTCTTGTTCAATTTAA 450 0.4244 MALISQPELPLDENDSQDMVIYQILKEGNELSNTMVQQRHQNGLDQNKDIKKKKYRGVRRRPWGKYAAEIRDSARNGARIWLGTFETAEEAAIAYDKAAFRMRGSKALLNFPHEFSASLQLSSTSKHGLSSGKINNKNSESSASNSCSI* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2691 149 ProSiteProfiles AP2/ERF domain profile. 54 112 IPR001471 GO:0003700|GO:0006355
Psa7g2691 149 CDD AP2 53 113 IPR001471 GO:0003700|GO:0006355
Psa7g2691 149 SUPERFAMILY DNA-binding domain 54 114 IPR016177 GO:0003677
Psa7g2691 149 Pfam AP2 domain 54 104 IPR001471 GO:0003700|GO:0006355
Psa7g2691 149 MobiDBLite consensus disorder prediction 130 149 - -
Psa7g2691 149 SMART rav1_2 54 118 IPR001471 GO:0003700|GO:0006355
Psa7g2691 149 PANTHER DNA-BINDING DOMAIN 7 124 IPR044808 GO:0003700|GO:0009873
Psa7g2691 149 PANTHER PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI5 7 124 - -
Psa7g2691 149 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Psa7g2691 149 PRINTS Ethylene responsive element binding protein signature 78 94 IPR001471 GO:0003700|GO:0006355
Psa7g2691 149 Gene3D AP2/ERF domain 53 113 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2691 Psa-Chr7 191901720 191902518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2691 9 112 AP2-EREBP Transcription Factor Family AT5G47220 50.394 8.67e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Psa7g2691 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2691 K13433 - zju:112489252 171.785