Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2682 ATGACATGGTGCAATGACTCAAATAATCAAGATAGAGGCATTGAACTAATCACATCCAATCAAAGTACTCTTATCACTGATGAAACAAAATCAACCCAAATTCGAACCTTAACTTGTCCCTCATGTGGTCATAACGTTGAATTCCAAGATCAGGGTGGAATCAATGATTTGCCGGGATTACCAGCTGGAGTGAAGTTCGATCCGAATGATCAAGAGATACTGCATCATTTGGAAGCAAAGATTCTGTTTGATGTGCCCAAGCTCCATCCTCTTATTGATGAGTTCATACCAACGCTTGAAGGAGAAAACGGAATCTGTTACACCCATCCAGAAAAGTTACCAGGTGTAAGAAAAGATGGACAGATTCGGCACTTCTTTCACAGGCCATCAAAAGCATACACAACAGGCACAAGGAAAAGAAGAAAGGTTCAAACAGAAGAAGAAGGAAGTGAGACAAGATGGCACAAAACAGGAAAAACTAGACCGGTTTTCATCGGTGGTGTCATCAAAGGTTTCAAAAAGATACTAGTACTCTACACTAACTATGGAAGGCAAAAGAAGCCTGAGAAGACTAATTGGGTGATGCATCAATATCATCTTGGTAGTAATGAAGAAGAGAAAGATGGTGAGCTAGTTGTTTCAAAGGTCTTTTACCAAACTCAACCTCGACAGTGTGGTGCTAATAATAGTTCCAATATTATTATAAAGGATGCTTATGAAAATAGACTGATGATGACTCAAGGAAATGTCCAAGATGATAATGAAGCTCCTTCTATGGATTACTACAATTCTCCTTTCATAAACTATGACCATGTTGGTCATAATTTGGAACCTCAGCTTATTCCAAACTTGGTTATGCAAGGTGATGGTTCTTCTTTTATTCGATTAGCAATGGATGCAAACAAAGCAAGGTTGGATAGAAATTAG 927 0.3862 MTWCNDSNNQDRGIELITSNQSTLITDETKSTQIRTLTCPSCGHNVEFQDQGGINDLPGLPAGVKFDPNDQEILHHLEAKILFDVPKLHPLIDEFIPTLEGENGICYTHPEKLPGVRKDGQIRHFFHRPSKAYTTGTRKRRKVQTEEEGSETRWHKTGKTRPVFIGGVIKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCGANNSSNIIIKDAYENRLMMTQGNVQDDNEAPSMDYYNSPFINYDHVGHNLEPQLIPNLVMQGDGSSFIRLAMDANKARLDRN* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2682 308 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 293 IPR044799 GO:0003700
Psa7g2682 308 ProSiteProfiles NAC domain profile. 60 219 IPR003441 GO:0003677|GO:0006355
Psa7g2682 308 Pfam No apical meristem (NAM) protein 61 200 IPR003441 GO:0003677|GO:0006355
Psa7g2682 308 MobiDBLite consensus disorder prediction 133 155 - -
Psa7g2682 308 SUPERFAMILY NAC domain 56 219 IPR036093 GO:0003677|GO:0006355
Psa7g2682 308 Gene3D NAC domain 69 223 IPR036093 GO:0003677|GO:0006355
Psa7g2682 308 MobiDBLite consensus disorder prediction 139 155 - -
Psa7g2682 308 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2682 Psa-Chr7 191299079 191302110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2682 1 237 NAC Transcription Factor Family AT4G28500 68.487 9.93e-120 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Psa7g2682 NAM 7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2682 - - gmx:100795920 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2682 7 191299079 191302110 Psa7g2682 7 191299079 191302110 ECH
Psa1g4629 1 352915235 352921300 Psa7g2682 7 191299079 191302110 ECH