Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2680 ATGGAAGAAAAACATAAACCATTCTTAATGTTTTGCATTCTTCTATCAATGTTATCTCTACCAACAAACGTATCATGTTTAAACCAAGATGGGTTGTACCTGTACCAATTCAAACTCACCTTAGACGATCCCGACTCATCTCTCTCTTCATGGAACCCAACTGACACCACACCCTGCAACTGGTACGGTGTCCGCTGCGACTCCACAAACACCACCGTAACAGAACTCGACCTCTCCGACACCAACATCCAAGGCCCATTCACGGCGTCGATTCTCTGCCGTCTCCCCAACCTCTCCTCTATCAACCTCTTCAACAACTCCATTAACCAAACCTTCCCTCTCCAAATCTCCCTCTGTAAAAACCTCCTCCACCTCGACCTCTCCCAGAATCTCCTCACCGGTCCCCTCCCGGAATCTCTCTCCACCCTCCCTAATCTCCGCTACCTCGACCTCACCGGAAACAACTTCTCCGGTAACATACCACTCTCCTTCGGAACATTTCAAAAACTCCAAGTCCTCTCACTTGTTTCCAATCTTCTAGAAGGTACCATACCTCCATCTCTTGGAAACATCACTACTTTGAAAATGCTTAACCTTTCTTACAACCCGTTTTTCCCGGGTCGGATCCCGTCGGAGCTTGGAAACCTAACGAACCTCGAGGTTCTTTGGTTAACGCAATGCAACCTTGTTGGTGTCATTCCTGAAACTCTTGGGAAGCTTAAGAAGCTTAAGGACTTGGACCTTGCGTTGAATGATCTTTACGGTTCTATCCCGAGTTCACTCACTGAGTTAACGAGTTTGAGACAGATTGAGTTGTATAATAACTCGTTATCCGGTGAGTTGCCGAGGGGAATGGGGAAGCTTACGTCGTTGAGGCTTCTTGACGCGTCGATGAATCATTTGACGGGGAGGATTCCGGAGGAGCTTTGTTCGTTGCCGTTAGAGAGTCTTAATCTGTATGAGAATCGTTTTGAGGGTGAGTTACCGGCGAGTATAGCTGACTCGCCGAATCTTTATGAGTTGAGGTTGTTTGGGAACCGGCTTACCGGGAAGTTGCCAGAGAATCTCGGGAAACGTTCTCCTCTGAGGTGGCTTGACGTTTCGAGCAACCAGTTTTGGGGAAGTATTCCGACGAGTTTGTGTGATCTTGGTGAGTTGGAGGAGCTTTTGATGATATACAATTTGTTCACCGGTGAGATTCCGGCGAGTTTAGGGACGTGTCAGAGCTTGTCGCGTGTACGTTTAGGTTATAATAGGTTTTCCGGCGAGGTTCCGGCGGGGATCTGGGGTCTTCCTCATGTGTATCTTCTCGAACTTGCTCATAACTCGTTTTCCGGTTCCATTTCGAAGACCATTGCCGGAGCAGGGAACCTTTCGTTGTTGATTTTGTCGAAAAACAACTTCTCGGGTACTGTTCCCGATGAGGTTGGGTGGTTGGAAAATCTGGTCGAGTTTTCTGCCGCTGATAACATGTTCAGTGGCTCACTTCCAGATAGTTTGGTCAATCTTGGGCAGCTTGGGATTCTTGATTTTCACAACAACAGGCTCTCTGGGGAACTACCAAAGGGGATTCATTCTTGGAAAAAGCTCAATGATTTGAATTTGGCCAACAATGGAATTGGTGGAAAGATTCCTGATGAGATTGGTAGCTTATCGGTTCTTAATTTTCTTGATCTTTCGCGTAATCAGTTTGCAGGAAAAATCCCTCATGGGTTGCAGAATCTAAAGCTCAATCAGCTGAACTTTTCGTTTAATCGTCTTTCGGGTGAACTTCCTCCTCAATTGGCTAAGGAAATGTACAAGTCTAGTTTCTTGGGAAACCCTGGTTTGTGTGGAGATTTGAAAGGTTTGTGTGATGGTAGGAATGAAGTGAAGAATTTGGGTTATGTTTGGTTGCTTCGAGCAATTTTTCTTCTCGCCGTTTTGGTGTTCCTAGTTGGTGTTGTCTGGTTCTATTTTAGGTACAAGAATTTCAAGGAAGCAAAAAGGGCCATTGATAAATCAAAATGGACTTTAATGTCGTTCCATAAGCTGGGTTTTGGGGAAGACGAGATTTTGAATTGTCTTGATGAAGATAATGTCATTGGAAGTGGCTCATCAGGAAAGGTTTACAAGGTTGTACTTAACAGCGGGGAAGCTGTTGCTGTGAAGAAGATATGGGGAGGGGCCAGAAAGGAAGTGGAGAGTGGTGATGTTGAGAAGGGTAGGGTTCAAGACAATGCTTTTGATGCAGAGGTTGAAACATTGGGGAAAATCCGACACAAGAACATTGTCAAGTTATGGTGTTGCTGTACCACTAGGGATTGCCAGCTTTTGGTTTATGAGTATATGCAAAATGGTAGTCTCGGTGATTTGCTTCATAGCAGTAAAGGAGGGTTGTTGGAATGGCCAACAAGATACAAGATAGCTGTGGATGCTGCGGATGGACTCTCTTATCTCCATCATGACTGTGTTCCCGCAATCGTTCATAGAGATGTTAAATCTAACAATATCTTGTTGGATGGTGACTTTGGTGCAAGGGTGGCCGATTTTGGATTAGCTAAGGTTGTCGAAACCACAGGGAAAGGAATTAAATCCATGTCCATCATAGCTGGTTCATGTGGCTATATTGCACCAGAATATGCGTACACGCTTAGAGTGAACGAGAAGAGCGACATTTATAGTTTTGGTGTTGTAATACTTGAATTGGTTACCGGAAGACGGCCGGTGGATCCTGAATTCGGTGAGAAAGATTTGGTAAAATGGGTTTGCACTACATTGGATCAGAAAGGTGTGGATCATGTAATTGACTCGAGGCTGGATTCATGTTTCAAAGATGAAATTTGCAAGGTTTTCAACATTGGCCTAATGTGCACTAGTCCTCTTCCAATCAACCGGCCTTCAATGAGAAGAGTAGTGAAGATGTTGCAAGAGGTAGGAATAGAGAACCAAATGAAACCTGCCAAGAAAGATGGAAAATTAACCCCTTATTACTATGATGATGCCTCAGATCATGGAAGTGTTGTTTGA 3009 0.4473 MEEKHKPFLMFCILLSMLSLPTNVSCLNQDGLYLYQFKLTLDDPDSSLSSWNPTDTTPCNWYGVRCDSTNTTVTELDLSDTNIQGPFTASILCRLPNLSSINLFNNSINQTFPLQISLCKNLLHLDLSQNLLTGPLPESLSTLPNLRYLDLTGNNFSGNIPLSFGTFQKLQVLSLVSNLLEGTIPPSLGNITTLKMLNLSYNPFFPGRIPSELGNLTNLEVLWLTQCNLVGVIPETLGKLKKLKDLDLALNDLYGSIPSSLTELTSLRQIELYNNSLSGELPRGMGKLTSLRLLDASMNHLTGRIPEELCSLPLESLNLYENRFEGELPASIADSPNLYELRLFGNRLTGKLPENLGKRSPLRWLDVSSNQFWGSIPTSLCDLGELEELLMIYNLFTGEIPASLGTCQSLSRVRLGYNRFSGEVPAGIWGLPHVYLLELAHNSFSGSISKTIAGAGNLSLLILSKNNFSGTVPDEVGWLENLVEFSAADNMFSGSLPDSLVNLGQLGILDFHNNRLSGELPKGIHSWKKLNDLNLANNGIGGKIPDEIGSLSVLNFLDLSRNQFAGKIPHGLQNLKLNQLNFSFNRLSGELPPQLAKEMYKSSFLGNPGLCGDLKGLCDGRNEVKNLGYVWLLRAIFLLAVLVFLVGVVWFYFRYKNFKEAKRAIDKSKWTLMSFHKLGFGEDEILNCLDEDNVIGSGSSGKVYKVVLNSGEAVAVKKIWGGARKEVESGDVEKGRVQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCQLLVYEYMQNGSLGDLLHSSKGGLLEWPTRYKIAVDAADGLSYLHHDCVPAIVHRDVKSNNILLDGDFGARVADFGLAKVVETTGKGIKSMSIIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPVDPEFGEKDLVKWVCTTLDQKGVDHVIDSRLDSCFKDEICKVFNIGLMCTSPLPINRPSMRRVVKMLQEVGIENQMKPAKKDGKLTPYYYDDASDHGSVV* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2680 1002 SUPERFAMILY L domain-like 362 611 - -
Psa7g2680 1002 Gene3D Ribonuclease Inhibitor 206 314 IPR032675 -
Psa7g2680 1002 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Psa7g2680 1002 Gene3D Ribonuclease Inhibitor 25 205 IPR032675 -
Psa7g2680 1002 PANTHER LRR RECEPTOR-LIKE KINASE 10 984 - -
Psa7g2680 1002 SUPERFAMILY L domain-like 25 204 - -
Psa7g2680 1002 Gene3D Transferase(Phosphotransferase) domain 1 777 993 - -
Psa7g2680 1002 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 10 984 - -
Psa7g2680 1002 Gene3D Ribonuclease Inhibitor 315 621 IPR032675 -
Psa7g2680 1002 ProSiteProfiles Protein kinase domain profile. 689 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2680 1002 SMART LRR_typ_2 288 312 IPR003591 -
Psa7g2680 1002 SMART LRR_typ_2 503 526 IPR003591 -
Psa7g2680 1002 SMART LRR_typ_2 264 287 IPR003591 -
Psa7g2680 1002 SMART LRR_typ_2 95 119 IPR003591 -
Psa7g2680 1002 SMART LRR_typ_2 143 169 IPR003591 -
Psa7g2680 1002 SMART LRR_typ_2 551 574 IPR003591 -
Psa7g2680 1002 SMART LRR_typ_2 383 407 IPR003591 -
Psa7g2680 1002 SMART LRR_typ_2 216 239 IPR003591 -
Psa7g2680 1002 SUPERFAMILY L domain-like 163 425 - -
Psa7g2680 1002 Pfam Leucine rich repeat 96 156 IPR001611 GO:0005515
Psa7g2680 1002 ProSitePatterns Protein kinases ATP-binding region signature. 695 718 IPR017441 GO:0005524
Psa7g2680 1002 Gene3D Phosphorylase Kinase; domain 1 673 776 - -
Psa7g2680 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 821 833 IPR008271 GO:0004672|GO:0006468
Psa7g2680 1002 SMART serkin_6 689 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2680 1002 SUPERFAMILY Protein kinase-like (PK-like) 685 970 IPR011009 -
Psa7g2680 1002 Pfam Protein kinase domain 691 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2680 Psa-Chr7 191193307 191197607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2680 21 1002 Receptor kinase-like Gene Family AT1G28440 70.981 0.0 1427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa7g2680 Pkinase 3.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2680 - - gmx:100819887 1699.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2680 7 191193307 191197607 Psa7g2680 7 191193307 191197607 ECH
Psa1g4633 1 353268904 353273430 Psa7g2680 7 191193307 191197607 ECH