Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2671 ATGCATATCGATAGGAAACGAAAGGGTGATGATGCCAAAATTACAAGGGATGTCGAAGCAAATGATATGAGAATCCGGAAAGAGCTCGAAAAACAAGAAAACCTCAGACGAAAGAATGAGGAGCGAGTAAAAAAAGAAGTGGAGAGACAAGATCGTGAAAGAAGAAAGGAAGAAGAGAGATTGATGCGTGAGAGACTGCGTGAAGAGGAAAGAATAAAACGAGAGGAAAAACGTGAAAGTGAACGAAGGGAAAAGTATTTGCTGAGAGAAAATTTAAAAGCTGAGAGAATGAGGCAAAAAGAAGAGCTTCGAAAAGAGAAAGATGAAGAGAGAAGGAAAGCTGCCCTTGAGAAGGCAACTGCCCGTAAAATAGCTAAGGAATCCATGGAACTTATTGAGGACGAACAGCTGGAAATGATGGAGTTAGCTGCCTCAAGCAAGGGGCTTCCCTCTATTATCCGTCTTGATTTTGATACTTTGCAAAACATTGAGTCATTTAGGGGTTCATTGTGTCTTTTCCCACCCGAGAATGTAAAGCTAAGAAAACCATTTGCCATCCAACCGTGGATCAATTCAGAAGAGAATATTGGCAACCTCCTCATGGTTTGGAGGTTTTTGATTACCTTTGCTGATGTTTTGGAGTTATGGCCTTTTACTCTTGATGAGTTCGTGCAAGCATTTCACGATTATGATTCAAGATTGTTGGGTGAGATACATGTTTCTCTCCTTAAGGTGATAATGAAAGACATTGAAGATGTTGCAAGGACACCTTCTTCAGGATTAGGAATGAATCAGAATGGTGCTGCTAATTCTGGAGGCGGCCATCCAGAGATTGTGGAAGGGGCGTATGCTTGGGGCTTTGACATACGGAATTGGCATAGGCACTTAAATCAATTGACATGGCCAGAAATTTTCCGACAGCTAGCATTATCTGCAGGATATGGACCGCAGTTTAAGAAAAGCAGTATTCCATGTTCACGTGCAAATAATAAAAACGAGGGAAGAAGTTGTGAAGATGTCGTTTCTGCACTTCGTAATGGTTCAGCAGCTGTAAATGCCGTTGCAAAAATGCAAGAGAGAGGTTTACTAGGTCCTCGGAGATCTAGGCATCGGTTAACTCCTGGAACAGTTAAATTTGCAGCATTTCATGTTCTCTCACTAGAGGATGGAGATGGATTGAATGTAATAGAGCTTGCCGAAAAAATTCAGAAATCCGGTCTTCGGGACCTGACGACCAGCAAGACACCCGAGGCATCAATTTCTGTTGCTTTGACAAGAGATGCCAAGCTTTTTGAAAGAGTAGCCCCATCAACTTATTGTGTACGTGCTGCATTTAGGAAGGACCCCGCTGATGCTGAGTCCATTCTTTCTGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCTAGCTGAAGAAGATGCTGATGATGTTGAAAGAGAAGAGTCAGAAAGTGAAGTTGACGAGGATCCTGAAGTTGATGATTTGGTTAATCCTTCAAGTGTTCACAAAACATCTGAACTGTTTAATGATTTCTCATCAAATGGAAAAGAAAATCAAGGTCATGATGGAAAACTTAAAGAGGAGTTCAATAAGGATCTACCTTGTTTTCCTGACAATGGTTCTAAGAATGCTGATTATCCAAGTGCTGTTTCTGGACAACCTGTTGCTTGTGAAAATCTAAGTGCCAGAAATCTAGGCGAAGATAATATGGAAATTGATGAAAGTAAGTCTGGAGAGTCATGGATTCAAGGGCTTACTGAAGGAGAATATTCTGATCTCAGTGTAGAGGAGCGATTAAATGCTCTTGTTGTATTGGTTGGTGTGGCAAATGAAGGAAATTCAATCCGTGTTGTTCTCGAGGATCGTTTGGAAGCAGCAAATGCTCTGAAGAAGCAAATGTTGGCAGAGGCACACATTGATAAAACTCGCGTGAAAGATGATAATGTCAATAAGTCAGATTTTCCTTCTATCAATGGTATCAAGGTTGAAACACAGCTCGCATGTGCTGCAGTGGAGAGCAATCCAAGCCCATTGCTTGATATTAATAATTGCAATAATAATGAGGATTCTCCCAGCAAAGCAGACAATAAAAGTCTAGCTCTTGTTGGACAAAACCTATCTGAAAAGCTCTCATCAGGTCAAGATCTCTGCATAGGTCCTGATAATCCTCAGACTATGTTATCTGCACAATATTCAAAACGGTCACGATCTCAGTTAAAATCTTATATTTCCCACATAGCAGAGGAGATGTACATCTATAGATCCTTACCCCTCGGGCAAGACCGTAGACATAATCGATATTGGCAATTTGTGGCATCTTCTTCCTGCAATGATCCTGGCTCGGGCAGGATCTTTGTTGAATATCATGATGGAAAATGGAGGCTTATTGATTCCGAAGAGGCCTTTGACACACTTCTGAATTCACTGGATTCACGAGGGATCAGGGAATCACATTTGCGACTAATGTTGCTAAAGATTGAGAATACATTTAAGGAAACTGTTCAAAAGAATGCAAAATGTGCCAAAATTGGAAACATAGATGAAATACGTGTTAAAAATGAAGTTGATGAAACGGATTCCAGTCCCGATCACCATGCTAGCTCTGACAGTCCTAGTAGTACTCTTTGTGGCTTGAACTCTGATACTTCAGAAACTTCGTCATCCTTCAGAATTGAGCTTGGAAAAAACGAGAGCGACAAGAAAGCTGCCTTGAGAAGGTATCGAGATTTTCAAAAATGGATGTGGAAGGAATGCTATAACCCATCAATATTATGTGCAACGAAATATGGAAAAAAGAGATGCAAACCTCAGGTTGACATATGTGATATCTGTCTCAACCTTTATTGCTTGGAAGACTCCCATTGCAATCATTGCCACCTTACTTTTCCGTCAAATGATGGATTAAATGTTTCTAAACATGCAATTCAATGTGGAGACAAGTTAGCCAAAGATATTTGTATTTCGGAATCTCCTCTTCCACTGCGAACAAGGTTGCTTAAGGCTCTGCTGGCTTTTATTGAGGTATCTGTTCCACCTGAAGCATTTCAGTCAATTTGGACCGAGGATATTAGGAGGCTTTGGGGTGTAAAGTTGAGCAGATCATCTTCTGCTGAGGAACTTCTACAGATATTGACTCTATTTGAGAGAGCACTAAAGCGAGACTTTTTATCATCACCTTTTGCTACAACTGGGGATTTGTTGGGGATGAACACTATGTCTGAGAGTGCAGCACTTACTTCTATGGATCTCAAGTCAGTTACTGTTCTTCCATGGGTTCCACGGACCACTTCAGCTGTGTCTCTCAGACTTTTTGAGCTTGACACATCAATCTCCTACGTTAAGCTTGAGAAACCTGAGCCCTATCAGGAGAAAGAAGCTAGATACATAAAGCTTCCTTCAAGATATGCCTCTGTTAAATCTACTAAAGCGGCTGAACCATCATATATGGACTGTGATGAATTCATGAAAGTGAGGTCTGCCCCTATGAAAATCGTGAGAAGCAGCAAAAAACGGGCACGAGTGAATCATGACAAAGGAAGGACTAAAAAGCTGTCTAAAAGAACAAATGATTCCAAAAGAGATAATGACCGCCTCAATTTTAAGGTCACTGAGAATCTAAGTCAAAGAATAGAACAGCTGGGACAAGGATCACAAGTGCACGCAGGTGGACGTGGCCGCCGGACAGTTAGGAAAAGGAGAGAGGAGAGTAGGGCTGTTGAAGATTTGTTGCTGAGCAGTAGGGCTGCCATTAATAGCCCCAATTTTAGTAGAGAACCATCGAGAATCATGGATGAGGACTGGAGTGATGAGAAGGCAAGTCCCATCCTAAGGGAAGCTGCTGAGATGAGTAGCAGCAGTGAAGAGGATGAATATGATGACAACATCCAGGCAATGGAATCCGATGACAATGTTGAAGCAGTTGAATATGGTCAAGGAAACTGGGAGATAGGTTTTAACGGTACCCCCAACAGATGGAATAGGGATTTGGTTGGAATGAGTGATGAAGAACAACACTTGGAGGCTTTTGAAGATGACAATGACAATGTCATTGAAGGGAATGAAGAGGAAGAAGAGGAGGATGAGGAGGAAGAGGAGGGTTCTGAAGCTGATGTTATTATGAGTGATGGTTCAGATGGTATGGCAAATAGAGTTGTAAATGAAGAAAGCTCAGACTCGAGTGACTCGGAAGATTATTCTGATTAG 4209 0.4136 MHIDRKRKGDDAKITRDVEANDMRIRKELEKQENLRRKNEERVKKEVERQDRERRKEEERLMRERLREEERIKREEKRESERREKYLLRENLKAERMRQKEELRKEKDEERRKAALEKATARKIAKESMELIEDEQLEMMELAASSKGLPSIIRLDFDTLQNIESFRGSLCLFPPENVKLRKPFAIQPWINSEENIGNLLMVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVSLLKVIMKDIEDVARTPSSGLGMNQNGAANSGGGHPEIVEGAYAWGFDIRNWHRHLNQLTWPEIFRQLALSAGYGPQFKKSSIPCSRANNKNEGRSCEDVVSALRNGSAAVNAVAKMQERGLLGPRRSRHRLTPGTVKFAAFHVLSLEDGDGLNVIELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERVAPSTYCVRAAFRKDPADAESILSEARKKIQIFENGFLAEEDADDVEREESESEVDEDPEVDDLVNPSSVHKTSELFNDFSSNGKENQGHDGKLKEEFNKDLPCFPDNGSKNADYPSAVSGQPVACENLSARNLGEDNMEIDESKSGESWIQGLTEGEYSDLSVEERLNALVVLVGVANEGNSIRVVLEDRLEAANALKKQMLAEAHIDKTRVKDDNVNKSDFPSINGIKVETQLACAAVESNPSPLLDINNCNNNEDSPSKADNKSLALVGQNLSEKLSSGQDLCIGPDNPQTMLSAQYSKRSRSQLKSYISHIAEEMYIYRSLPLGQDRRHNRYWQFVASSSCNDPGSGRIFVEYHDGKWRLIDSEEAFDTLLNSLDSRGIRESHLRLMLLKIENTFKETVQKNAKCAKIGNIDEIRVKNEVDETDSSPDHHASSDSPSSTLCGLNSDTSETSSSFRIELGKNESDKKAALRRYRDFQKWMWKECYNPSILCATKYGKKRCKPQVDICDICLNLYCLEDSHCNHCHLTFPSNDGLNVSKHAIQCGDKLAKDICISESPLPLRTRLLKALLAFIEVSVPPEAFQSIWTEDIRRLWGVKLSRSSSAEELLQILTLFERALKRDFLSSPFATTGDLLGMNTMSESAALTSMDLKSVTVLPWVPRTTSAVSLRLFELDTSISYVKLEKPEPYQEKEARYIKLPSRYASVKSTKAAEPSYMDCDEFMKVRSAPMKIVRSSKKRARVNHDKGRTKKLSKRTNDSKRDNDRLNFKVTENLSQRIEQLGQGSQVHAGGRGRRTVRKRREESRAVEDLLLSSRAAINSPNFSREPSRIMDEDWSDEKASPILREAAEMSSSSEEDEYDDNIQAMESDDNVEAVEYGQGNWEIGFNGTPNRWNRDLVGMSDEEQHLEAFEDDNDNVIEGNEEEEEEDEEEEEGSEADVIMSDGSDGMANRVVNEESSDSSDSEDYSD* 1403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2671 1402 MobiDBLite consensus disorder prediction 1336 1402 - -
Psa7g2671 1402 MobiDBLite consensus disorder prediction 1 20 - -
Psa7g2671 1402 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 2 1402 IPR044977 GO:0006357
Psa7g2671 1402 MobiDBLite consensus disorder prediction 474 495 - -
Psa7g2671 1402 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 579 622 IPR028942 -
Psa7g2671 1402 Coils Coil 1341 1361 - -
Psa7g2671 1402 SMART testlast3 193 252 IPR018501 -
Psa7g2671 1402 ProSiteProfiles DDT domain profile. 193 252 IPR018501 -
Psa7g2671 1402 MobiDBLite consensus disorder prediction 1340 1373 - -
Psa7g2671 1402 MobiDBLite consensus disorder prediction 858 881 - -
Psa7g2671 1402 Pfam DDT domain 194 249 IPR018501 -
Psa7g2671 1402 MobiDBLite consensus disorder prediction 1171 1198 - -
Psa7g2671 1402 Coils Coil 89 120 - -
Psa7g2671 1402 Coils Coil 618 638 - -
Psa7g2671 1402 MobiDBLite consensus disorder prediction 34 60 - -
Psa7g2671 1402 MobiDBLite consensus disorder prediction 867 881 - -
Psa7g2671 1402 PANTHER HOMEOBOX DOMAIN PROTEIN 2 1402 - -
Psa7g2671 1402 MobiDBLite consensus disorder prediction 1217 1236 - -
Psa7g2671 1402 Pfam HB1, ASXL, restriction endonuclease HTH domain 375 443 IPR007759 GO:0006355
Psa7g2671 1402 Coils Coil 29 83 - -
Psa7g2671 1402 ProSiteProfiles HARE-type HTH domain profile. 375 444 IPR007759 GO:0006355
Psa7g2671 1402 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 756 828 IPR028941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2671 Psa-Chr7 190496962 190505764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2671 3 1325 Homeobox Transcription Factor Family AT1G28420 50.437 0.0 1128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Psa7g2671 WSD 9.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2671 - - gmx:100818817 1808.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2671 7 190496962 190505764 Psa7g2671 7 190496962 190505764 ECH
Psa7g2671 7 190496962 190505764 Psa1g4642 1 353558675 353561352 PCT