Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa7g2671 | ATGCATATCGATAGGAAACGAAAGGGTGATGATGCCAAAATTACAAGGGATGTCGAAGCAAATGATATGAGAATCCGGAAAGAGCTCGAAAAACAAGAAAACCTCAGACGAAAGAATGAGGAGCGAGTAAAAAAAGAAGTGGAGAGACAAGATCGTGAAAGAAGAAAGGAAGAAGAGAGATTGATGCGTGAGAGACTGCGTGAAGAGGAAAGAATAAAACGAGAGGAAAAACGTGAAAGTGAACGAAGGGAAAAGTATTTGCTGAGAGAAAATTTAAAAGCTGAGAGAATGAGGCAAAAAGAAGAGCTTCGAAAAGAGAAAGATGAAGAGAGAAGGAAAGCTGCCCTTGAGAAGGCAACTGCCCGTAAAATAGCTAAGGAATCCATGGAACTTATTGAGGACGAACAGCTGGAAATGATGGAGTTAGCTGCCTCAAGCAAGGGGCTTCCCTCTATTATCCGTCTTGATTTTGATACTTTGCAAAACATTGAGTCATTTAGGGGTTCATTGTGTCTTTTCCCACCCGAGAATGTAAAGCTAAGAAAACCATTTGCCATCCAACCGTGGATCAATTCAGAAGAGAATATTGGCAACCTCCTCATGGTTTGGAGGTTTTTGATTACCTTTGCTGATGTTTTGGAGTTATGGCCTTTTACTCTTGATGAGTTCGTGCAAGCATTTCACGATTATGATTCAAGATTGTTGGGTGAGATACATGTTTCTCTCCTTAAGGTGATAATGAAAGACATTGAAGATGTTGCAAGGACACCTTCTTCAGGATTAGGAATGAATCAGAATGGTGCTGCTAATTCTGGAGGCGGCCATCCAGAGATTGTGGAAGGGGCGTATGCTTGGGGCTTTGACATACGGAATTGGCATAGGCACTTAAATCAATTGACATGGCCAGAAATTTTCCGACAGCTAGCATTATCTGCAGGATATGGACCGCAGTTTAAGAAAAGCAGTATTCCATGTTCACGTGCAAATAATAAAAACGAGGGAAGAAGTTGTGAAGATGTCGTTTCTGCACTTCGTAATGGTTCAGCAGCTGTAAATGCCGTTGCAAAAATGCAAGAGAGAGGTTTACTAGGTCCTCGGAGATCTAGGCATCGGTTAACTCCTGGAACAGTTAAATTTGCAGCATTTCATGTTCTCTCACTAGAGGATGGAGATGGATTGAATGTAATAGAGCTTGCCGAAAAAATTCAGAAATCCGGTCTTCGGGACCTGACGACCAGCAAGACACCCGAGGCATCAATTTCTGTTGCTTTGACAAGAGATGCCAAGCTTTTTGAAAGAGTAGCCCCATCAACTTATTGTGTACGTGCTGCATTTAGGAAGGACCCCGCTGATGCTGAGTCCATTCTTTCTGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCTAGCTGAAGAAGATGCTGATGATGTTGAAAGAGAAGAGTCAGAAAGTGAAGTTGACGAGGATCCTGAAGTTGATGATTTGGTTAATCCTTCAAGTGTTCACAAAACATCTGAACTGTTTAATGATTTCTCATCAAATGGAAAAGAAAATCAAGGTCATGATGGAAAACTTAAAGAGGAGTTCAATAAGGATCTACCTTGTTTTCCTGACAATGGTTCTAAGAATGCTGATTATCCAAGTGCTGTTTCTGGACAACCTGTTGCTTGTGAAAATCTAAGTGCCAGAAATCTAGGCGAAGATAATATGGAAATTGATGAAAGTAAGTCTGGAGAGTCATGGATTCAAGGGCTTACTGAAGGAGAATATTCTGATCTCAGTGTAGAGGAGCGATTAAATGCTCTTGTTGTATTGGTTGGTGTGGCAAATGAAGGAAATTCAATCCGTGTTGTTCTCGAGGATCGTTTGGAAGCAGCAAATGCTCTGAAGAAGCAAATGTTGGCAGAGGCACACATTGATAAAACTCGCGTGAAAGATGATAATGTCAATAAGTCAGATTTTCCTTCTATCAATGGTATCAAGGTTGAAACACAGCTCGCATGTGCTGCAGTGGAGAGCAATCCAAGCCCATTGCTTGATATTAATAATTGCAATAATAATGAGGATTCTCCCAGCAAAGCAGACAATAAAAGTCTAGCTCTTGTTGGACAAAACCTATCTGAAAAGCTCTCATCAGGTCAAGATCTCTGCATAGGTCCTGATAATCCTCAGACTATGTTATCTGCACAATATTCAAAACGGTCACGATCTCAGTTAAAATCTTATATTTCCCACATAGCAGAGGAGATGTACATCTATAGATCCTTACCCCTCGGGCAAGACCGTAGACATAATCGATATTGGCAATTTGTGGCATCTTCTTCCTGCAATGATCCTGGCTCGGGCAGGATCTTTGTTGAATATCATGATGGAAAATGGAGGCTTATTGATTCCGAAGAGGCCTTTGACACACTTCTGAATTCACTGGATTCACGAGGGATCAGGGAATCACATTTGCGACTAATGTTGCTAAAGATTGAGAATACATTTAAGGAAACTGTTCAAAAGAATGCAAAATGTGCCAAAATTGGAAACATAGATGAAATACGTGTTAAAAATGAAGTTGATGAAACGGATTCCAGTCCCGATCACCATGCTAGCTCTGACAGTCCTAGTAGTACTCTTTGTGGCTTGAACTCTGATACTTCAGAAACTTCGTCATCCTTCAGAATTGAGCTTGGAAAAAACGAGAGCGACAAGAAAGCTGCCTTGAGAAGGTATCGAGATTTTCAAAAATGGATGTGGAAGGAATGCTATAACCCATCAATATTATGTGCAACGAAATATGGAAAAAAGAGATGCAAACCTCAGGTTGACATATGTGATATCTGTCTCAACCTTTATTGCTTGGAAGACTCCCATTGCAATCATTGCCACCTTACTTTTCCGTCAAATGATGGATTAAATGTTTCTAAACATGCAATTCAATGTGGAGACAAGTTAGCCAAAGATATTTGTATTTCGGAATCTCCTCTTCCACTGCGAACAAGGTTGCTTAAGGCTCTGCTGGCTTTTATTGAGGTATCTGTTCCACCTGAAGCATTTCAGTCAATTTGGACCGAGGATATTAGGAGGCTTTGGGGTGTAAAGTTGAGCAGATCATCTTCTGCTGAGGAACTTCTACAGATATTGACTCTATTTGAGAGAGCACTAAAGCGAGACTTTTTATCATCACCTTTTGCTACAACTGGGGATTTGTTGGGGATGAACACTATGTCTGAGAGTGCAGCACTTACTTCTATGGATCTCAAGTCAGTTACTGTTCTTCCATGGGTTCCACGGACCACTTCAGCTGTGTCTCTCAGACTTTTTGAGCTTGACACATCAATCTCCTACGTTAAGCTTGAGAAACCTGAGCCCTATCAGGAGAAAGAAGCTAGATACATAAAGCTTCCTTCAAGATATGCCTCTGTTAAATCTACTAAAGCGGCTGAACCATCATATATGGACTGTGATGAATTCATGAAAGTGAGGTCTGCCCCTATGAAAATCGTGAGAAGCAGCAAAAAACGGGCACGAGTGAATCATGACAAAGGAAGGACTAAAAAGCTGTCTAAAAGAACAAATGATTCCAAAAGAGATAATGACCGCCTCAATTTTAAGGTCACTGAGAATCTAAGTCAAAGAATAGAACAGCTGGGACAAGGATCACAAGTGCACGCAGGTGGACGTGGCCGCCGGACAGTTAGGAAAAGGAGAGAGGAGAGTAGGGCTGTTGAAGATTTGTTGCTGAGCAGTAGGGCTGCCATTAATAGCCCCAATTTTAGTAGAGAACCATCGAGAATCATGGATGAGGACTGGAGTGATGAGAAGGCAAGTCCCATCCTAAGGGAAGCTGCTGAGATGAGTAGCAGCAGTGAAGAGGATGAATATGATGACAACATCCAGGCAATGGAATCCGATGACAATGTTGAAGCAGTTGAATATGGTCAAGGAAACTGGGAGATAGGTTTTAACGGTACCCCCAACAGATGGAATAGGGATTTGGTTGGAATGAGTGATGAAGAACAACACTTGGAGGCTTTTGAAGATGACAATGACAATGTCATTGAAGGGAATGAAGAGGAAGAAGAGGAGGATGAGGAGGAAGAGGAGGGTTCTGAAGCTGATGTTATTATGAGTGATGGTTCAGATGGTATGGCAAATAGAGTTGTAAATGAAGAAAGCTCAGACTCGAGTGACTCGGAAGATTATTCTGATTAG | 4209 | 0.4136 | MHIDRKRKGDDAKITRDVEANDMRIRKELEKQENLRRKNEERVKKEVERQDRERRKEEERLMRERLREEERIKREEKRESERREKYLLRENLKAERMRQKEELRKEKDEERRKAALEKATARKIAKESMELIEDEQLEMMELAASSKGLPSIIRLDFDTLQNIESFRGSLCLFPPENVKLRKPFAIQPWINSEENIGNLLMVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVSLLKVIMKDIEDVARTPSSGLGMNQNGAANSGGGHPEIVEGAYAWGFDIRNWHRHLNQLTWPEIFRQLALSAGYGPQFKKSSIPCSRANNKNEGRSCEDVVSALRNGSAAVNAVAKMQERGLLGPRRSRHRLTPGTVKFAAFHVLSLEDGDGLNVIELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERVAPSTYCVRAAFRKDPADAESILSEARKKIQIFENGFLAEEDADDVEREESESEVDEDPEVDDLVNPSSVHKTSELFNDFSSNGKENQGHDGKLKEEFNKDLPCFPDNGSKNADYPSAVSGQPVACENLSARNLGEDNMEIDESKSGESWIQGLTEGEYSDLSVEERLNALVVLVGVANEGNSIRVVLEDRLEAANALKKQMLAEAHIDKTRVKDDNVNKSDFPSINGIKVETQLACAAVESNPSPLLDINNCNNNEDSPSKADNKSLALVGQNLSEKLSSGQDLCIGPDNPQTMLSAQYSKRSRSQLKSYISHIAEEMYIYRSLPLGQDRRHNRYWQFVASSSCNDPGSGRIFVEYHDGKWRLIDSEEAFDTLLNSLDSRGIRESHLRLMLLKIENTFKETVQKNAKCAKIGNIDEIRVKNEVDETDSSPDHHASSDSPSSTLCGLNSDTSETSSSFRIELGKNESDKKAALRRYRDFQKWMWKECYNPSILCATKYGKKRCKPQVDICDICLNLYCLEDSHCNHCHLTFPSNDGLNVSKHAIQCGDKLAKDICISESPLPLRTRLLKALLAFIEVSVPPEAFQSIWTEDIRRLWGVKLSRSSSAEELLQILTLFERALKRDFLSSPFATTGDLLGMNTMSESAALTSMDLKSVTVLPWVPRTTSAVSLRLFELDTSISYVKLEKPEPYQEKEARYIKLPSRYASVKSTKAAEPSYMDCDEFMKVRSAPMKIVRSSKKRARVNHDKGRTKKLSKRTNDSKRDNDRLNFKVTENLSQRIEQLGQGSQVHAGGRGRRTVRKRREESRAVEDLLLSSRAAINSPNFSREPSRIMDEDWSDEKASPILREAAEMSSSSEEDEYDDNIQAMESDDNVEAVEYGQGNWEIGFNGTPNRWNRDLVGMSDEEQHLEAFEDDNDNVIEGNEEEEEEDEEEEEGSEADVIMSDGSDGMANRVVNEESSDSSDSEDYSD* | 1403 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa7g2671 | 1402 | MobiDBLite | consensus disorder prediction | 1336 | 1402 | - | - | |
Psa7g2671 | 1402 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Psa7g2671 | 1402 | PANTHER | HOMEOBOX-DDT DOMAIN PROTEIN RLT2 | 2 | 1402 | IPR044977 | GO:0006357 | |
Psa7g2671 | 1402 | MobiDBLite | consensus disorder prediction | 474 | 495 | - | - | |
Psa7g2671 | 1402 | Pfam | WSTF, HB1, Itc1p, MBD9 motif 1 | 579 | 622 | IPR028942 | - | |
Psa7g2671 | 1402 | Coils | Coil | 1341 | 1361 | - | - | |
Psa7g2671 | 1402 | SMART | testlast3 | 193 | 252 | IPR018501 | - | |
Psa7g2671 | 1402 | ProSiteProfiles | DDT domain profile. | 193 | 252 | IPR018501 | - | |
Psa7g2671 | 1402 | MobiDBLite | consensus disorder prediction | 1340 | 1373 | - | - | |
Psa7g2671 | 1402 | MobiDBLite | consensus disorder prediction | 858 | 881 | - | - | |
Psa7g2671 | 1402 | Pfam | DDT domain | 194 | 249 | IPR018501 | - | |
Psa7g2671 | 1402 | MobiDBLite | consensus disorder prediction | 1171 | 1198 | - | - | |
Psa7g2671 | 1402 | Coils | Coil | 89 | 120 | - | - | |
Psa7g2671 | 1402 | Coils | Coil | 618 | 638 | - | - | |
Psa7g2671 | 1402 | MobiDBLite | consensus disorder prediction | 34 | 60 | - | - | |
Psa7g2671 | 1402 | MobiDBLite | consensus disorder prediction | 867 | 881 | - | - | |
Psa7g2671 | 1402 | PANTHER | HOMEOBOX DOMAIN PROTEIN | 2 | 1402 | - | - | |
Psa7g2671 | 1402 | MobiDBLite | consensus disorder prediction | 1217 | 1236 | - | - | |
Psa7g2671 | 1402 | Pfam | HB1, ASXL, restriction endonuclease HTH domain | 375 | 443 | IPR007759 | GO:0006355 | |
Psa7g2671 | 1402 | Coils | Coil | 29 | 83 | - | - | |
Psa7g2671 | 1402 | ProSiteProfiles | HARE-type HTH domain profile. | 375 | 444 | IPR007759 | GO:0006355 | |
Psa7g2671 | 1402 | Pfam | Williams-Beuren syndrome DDT (WSD), D-TOX E motif | 756 | 828 | IPR028941 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa7g2671 | Psa-Chr7 | 190496962 | 190505764 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa7g2671 | 3 | 1325 | Homeobox Transcription Factor Family | AT1G28420 | 50.437 | 0.0 | 1128 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | DDT | Psa7g2671 | WSD | 9.7e-16 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa7g2671 | - | - | gmx:100818817 | 1808.88 |