Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2624 ATGGATGAAGGTTGTAATTCTTGGGTTAGGAGGACAAATTTCTCTCACACAGTTTGTCACCGGTTGGATTATTCGAGAATAGGTTCTTTCATCATTCGGCCAGATGCAGCGCTGAATTCAGGTCTGAATTCAAGGACAGTATCATCAATATCATCAGCAGCATCGGCTGCAGCAACAGTAGTACCAGCATCAGCTTCAGCAACAGTAGTACCAGCATCAGCTTCAGCAACAGTAGCACCAGCATCCGCTTCAACATCAGTAGCACCAGCATCCGCTTCTACATCAGTAGCACCAGCATCAGCACCTCCTGTCGTTTCTAAGGTTTCAAAGGTTCAGAAGAATCCTTCAACAAATAAGCAGAGATCTGTGTCTCCTTTGCCTGAAACCTATCTCTCTGAAACCTTTAAGGAAGCCAAGAATGAGCAGAAGAGGTTCTCAACTCCAGGTCGTAGGAGGAAAGAACAGGATACGAGAATCATGGGGAAACTACTGAACAAGGATTCTCAAGTTTCCAGATCTAAGTCGCCTCTTAAAAGTCCAATTAGGTACTTTGCATCAAAGAAATTCAGTGACAAGTCAATGAACCGGAAGGACTCTGGATGGACAAAGTATTTTGAACATGGTGGAGTAAAGGTTACTGCAGTAGAAACGGCCGAGGAATGGAATGTTGACCTCTGTAAGCTCTATATTGGTCTTAGGTTTGCTTATGGAGCTCACAGTAGGCTTTACCATGGTAAATATGAGGGTGAACCTGTTGCTGTGAAACTTATTAGGGTACCAGATGATGACGAAAATGGAATGTTGGCCGCTAAGTTAGAGAAGCAATTTATCACAGAAGTCACGCTTTTATCTCGCCTCCACCACCAAAATGTTCTTAAGTTCGTAGCAGCATGCAGAAACCCACCTGTTTATTGTGTTATCACAGAATATCTATCCGAGGGTTCCTTGAGGGCATATTTGCATAAGTTGGAAGGAAAAACCATGTCTCTACAGAAGCTAATTGCCTTTTCTCTGGATATTGCTCATGGAATGGAATATATACACTCTCAGGGTGTCATTCATCGAGACCTTAAACCAGAGAATGTCCTTATTAATGAAGACTTTCACCTTAAAATCGCTGATTTTGGTATTGCTTGTGAGGAAGCATACTGCGACTTACTTGCTGATGACCCCGGTACCTACCGCTGGATGGCACCAGAGATGATCAGACGAAAATCCTATGGGAGAAAGGTTGATGTGTATAGTTTTGGCCTTATCTTATGGGAGATGTTTACCGGTACAATACCATATGAGGATATGACTCCCATCCAGGCTGCTTTTGCTGTCGTAAACAAGAACTCAAGGCCTGTTATTCCTCTAAACTGCCCACCTGCCATGCGAGCTTTAATTGAGCAATGCTGGTCCTTGAATCCGGACAAAAGGCCCGAGTTCTGGCAGGTTGTTAAGGTGTTAGAACAGTTTGAATCTTCGCTTGCTCGTGATGGAACATTGACCCTGCTGCAAAATCCTTGCGGGCAAGATCATAAAAAAGGCCTTCTACATTGGATTCACAAGCTTGTTCCTGCTCATCACAGTATTGGTCCCGTGGTTAAACCAAAATTTACATGA 1608 0.4359 MDEGCNSWVRRTNFSHTVCHRLDYSRIGSFIIRPDAALNSGLNSRTVSSISSAASAAATVVPASASATVVPASASATVAPASASTSVAPASASTSVAPASAPPVVSKVSKVQKNPSTNKQRSVSPLPETYLSETFKEAKNEQKRFSTPGRRRKEQDTRIMGKLLNKDSQVSRSKSPLKSPIRYFASKKFSDKSMNRKDSGWTKYFEHGGVKVTAVETAEEWNVDLCKLYIGLRFAYGAHSRLYHGKYEGEPVAVKLIRVPDDDENGMLAAKLEKQFITEVTLLSRLHHQNVLKFVAACRNPPVYCVITEYLSEGSLRAYLHKLEGKTMSLQKLIAFSLDIAHGMEYIHSQGVIHRDLKPENVLINEDFHLKIADFGIACEEAYCDLLADDPGTYRWMAPEMIRRKSYGRKVDVYSFGLILWEMFTGTIPYEDMTPIQAAFAVVNKNSRPVIPLNCPPAMRALIEQCWSLNPDKRPEFWQVVKVLEQFESSLARDGTLTLLQNPCGQDHKKGLLHWIHKLVPAHHSIGPVVKPKFT* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2624 535 ProSiteProfiles Protein kinase domain profile. 228 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2624 535 SUPERFAMILY Protein kinase-like (PK-like) 213 484 IPR011009 -
Psa7g2624 535 SMART serkin_6 228 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2624 535 CDD STKc_MAP3K-like 237 484 - -
Psa7g2624 535 Gene3D Phosphorylase Kinase; domain 1 216 312 - -
Psa7g2624 535 MobiDBLite consensus disorder prediction 89 155 - -
Psa7g2624 535 PANTHER TYROSINE KINASE FAMILY PROTEIN 4 511 - -
Psa7g2624 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 352 364 IPR008271 GO:0004672|GO:0006468
Psa7g2624 535 MobiDBLite consensus disorder prediction 134 155 - -
Psa7g2624 535 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 4 511 - -
Psa7g2624 535 MobiDBLite consensus disorder prediction 107 129 - -
Psa7g2624 535 PRINTS Tyrosine kinase catalytic domain signature 308 321 IPR001245 GO:0004672|GO:0006468
Psa7g2624 535 PRINTS Tyrosine kinase catalytic domain signature 346 364 IPR001245 GO:0004672|GO:0006468
Psa7g2624 535 PRINTS Tyrosine kinase catalytic domain signature 392 402 IPR001245 GO:0004672|GO:0006468
Psa7g2624 535 PRINTS Tyrosine kinase catalytic domain signature 411 433 IPR001245 GO:0004672|GO:0006468
Psa7g2624 535 PRINTS Tyrosine kinase catalytic domain signature 455 477 IPR001245 GO:0004672|GO:0006468
Psa7g2624 535 Gene3D Transferase(Phosphotransferase) domain 1 313 507 - -
Psa7g2624 535 Pfam Protein tyrosine and serine/threonine kinase 236 484 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2624 Psa-Chr7 187596837 187600428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2624 1 523 MAP Kinase Kinase Kinase AT5G58950 56.061 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Psa7g2624 PK_Tyr_Ser-Thr 4.7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2624 - - gmx:100784454 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2624 7 187596837 187600428 Psa1g4681 1 355434859 355438455 PCT