Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2608 ATGTGCGAAAAAGTGATAGAGATAAACTTTGGTGATTCATTAAGCAATTTATCCCTTAAGGCATCATCATTAAAGTGTCCTCCACCATTTTTGTTGAAGACTTATGAATTATTGGAAGAAGGTAGTGAAGTTGAAGATGAGATGAAAATAGTGTCATGGAATGAAGAAGGAAATGGTTTTGTTGTTTGGTCTCCAGCTGAATTCTCAGAGCTTATCTTGCCTAGATTTTTCAAACACAACAATTTCTCTAGTTTTATTCGACAATTGAATACTTATGGGTTTAAGAAAATATCATCTAAAAGATGGGAATTTCAGCACGAGAAATTTCAGAAGGGTTGCAAGCACATGTTGGTCGAAATCAGTAGGAAAAAGTGTGAGCCAAGTGTGTTTCCTTCATACCTCAAATCTTGTTCGGAGGAAAATGGAATGGCTAATAATTCATCGGTGGAAGAAAATAATGATAGTAATCATGAACTACTTATGGAGGAGAATAAGAACCTAAAGAAGGAGAGAATGGAGTTGCAAATGCAAATAGCTGAATGTAAGGCACTTGAAATGAAGTTGTTGGAGTGTCTCTCACAATGTATGGATAGGCAACAATAA 603 0.3549 MCEKVIEINFGDSLSNLSLKASSLKCPPPFLLKTYELLEEGSEVEDEMKIVSWNEEGNGFVVWSPAEFSELILPRFFKHNNFSSFIRQLNTYGFKKISSKRWEFQHEKFQKGCKHMLVEISRKKCEPSVFPSYLKSCSEENGMANNSSVEENNDSNHELLMEENKNLKKERMELQMQIAECKALEMKLLECLSQCMDRQQ* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2608 200 Pfam HSF-type DNA-binding 30 123 IPR000232 GO:0003700|GO:0006355|GO:0043565
Psa7g2608 200 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-2A-LIKE 22 199 - -
Psa7g2608 200 SMART hsfneu3 26 123 IPR000232 GO:0003700|GO:0006355|GO:0043565
Psa7g2608 200 PRINTS Heat shock factor (HSF) domain signature 72 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Psa7g2608 200 PRINTS Heat shock factor (HSF) domain signature 85 97 IPR000232 GO:0003700|GO:0006355|GO:0043565
Psa7g2608 200 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 22 199 IPR027725 -
Psa7g2608 200 SUPERFAMILY "Winged helix" DNA-binding domain 27 123 IPR036390 -
Psa7g2608 200 ProSitePatterns HSF-type DNA-binding domain signature. 73 97 IPR000232 GO:0003700|GO:0006355|GO:0043565
Psa7g2608 200 Coils Coil 157 187 - -
Psa7g2608 200 Gene3D - 23 124 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2608 Psa-Chr7 186887081 186888401 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2608 18 193 HSF AT4G36990 37.629 4.19e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Psa7g2608 HSF_DNA-bind 1.6e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2608 K09419 - gmx:100789792 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2608 7 186887081 186888401 Psa7g2608 7 186887081 186888401 ECH