Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2595 ATGAGTTGTGGCTGCTTTGGAGCCTCAACTTTCAAGAAGAAAAGGACTCCGTCTAATACTCCTAATGAAATTGATGGGTATACACTTGATAATATTATGCATTTTTCTGAAAAAGACTTGAGAATGGCCACGGATAATTATCATCCAAGCAAAAAGATAGGACGCGGAGGTTTTGGCACAGTTTACCAGGGAACCTTAAAAAACGGAAGACAAGTAGCTGTGAAGAGCCTTTCAGCTAGCTCAAAGCAGGGCGTTCGCGAATTTTTAACTGAAATTAAAACTATATCACATGTTAAGCATCCAAACCTTGTTGAATTGGTGGGTTGCTGCGCTCAAGAACCTAATCGTACATTAGTTTATGAATATGTGGAAAACAACAGCCTTGATCGTGCATTACTAGGAAATACAAATACAAACATTAAGCTAGACTGGGGAAAAAGATCTAATATTTGCATAGGTACTGCTAAAGGTCTTACATTTCTTCACGAAGAAGTTGTTCCTCGCATTGTGCACAGAGACATCAAGGCTAGCAATATATTACTCGAGAGAGACTTTAATCCAAAAATAGGAGATTTCGGGCTGGCTAAATTATTTCCAGACGACATCACCCACATTAGCACAAGAATTGCTGGAACAACCGGTTACTTAGCGCCCGAATACGCAATGGGTGGCCAGTTAACCCTGAAGGCTGACGTATATAGTTTCGGAGTTCTAATACTTGAAATAATTAGCGGACAAAGCAGCGCCAAGACAAACTGGGGAGGCTCAAACAAATTCCTCTTGGAATGGGCCTGGCAACTTCATGAAGAAGGAAAACTGCTGGAGCTAGTGGATCCAGACATGGTTGAATATCCTAAGGAAGAAGTGATTAGGTACATGAAAGTAGCTTTTTTCTGCACACAAGCAGCAGCAACCAGAAGGCCAATGATGTCACAGGTTGTTGATATGCTTTCCAAGAATATAAGGCTTAATGAAAAGCAATTAACAGCACCAGGATTCTTCCAGGCTTCAGGAGAATCCTCTCTAAAGAAGTCATCCTTTGAGTCCACAAGCCATCAGTTTAGTTCTGTCCCTGCTAGTTTTACTCAGGTCAGTCCGCGGTGA 1104 0.4149 MSCGCFGASTFKKKRTPSNTPNEIDGYTLDNIMHFSEKDLRMATDNYHPSKKIGRGGFGTVYQGTLKNGRQVAVKSLSASSKQGVREFLTEIKTISHVKHPNLVELVGCCAQEPNRTLVYEYVENNSLDRALLGNTNTNIKLDWGKRSNICIGTAKGLTFLHEEVVPRIVHRDIKASNILLERDFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYAMGGQLTLKADVYSFGVLILEIISGQSSAKTNWGGSNKFLLEWAWQLHEEGKLLELVDPDMVEYPKEEVIRYMKVAFFCTQAAATRRPMMSQVVDMLSKNIRLNEKQLTAPGFFQASGESSLKKSSFESTSHQFSSVPASFTQVSPR* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2595 367 Pfam Protein tyrosine and serine/threonine kinase 50 317 IPR001245 GO:0004672|GO:0006468
Psa7g2595 367 SUPERFAMILY Protein kinase-like (PK-like) 31 349 IPR011009 -
Psa7g2595 367 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 361 - -
Psa7g2595 367 Gene3D Phosphorylase Kinase; domain 1 18 122 - -
Psa7g2595 367 SMART serkin_6 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2595 367 Gene3D Transferase(Phosphotransferase) domain 1 123 332 - -
Psa7g2595 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Psa7g2595 367 PIRSF ILK 7 330 - -
Psa7g2595 367 ProSiteProfiles Protein kinase domain profile. 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2595 367 PANTHER - 1 361 - -
Psa7g2595 367 CDD STKc_IRAK 53 319 - -
Psa7g2595 367 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Psa7g2595 367 MobiDBLite consensus disorder prediction 348 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2595 Psa-Chr7 186083067 186087018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2595 11 333 Receptor kinase-like Gene Family AT1G07650 53.517 6.69e-108 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa7g2595 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2595 - - gmx:100775344 636.336