Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2561 ATGGACAGTACAGATTCATCTTCATGCTCTCACCACCCTCACCTCCCACCAGGCTTTCGCTTCCACCCTACCGATGAAGAGCTCGTCGTTCATTACCTCAAGAGAAAAGCTGCTTCTGCACCTCTTCCTGTAGCCATAATAGCAGAGATTGATCTCTACAAATTCGACCCATGGGAGCTACCAAGTAAAGCAACTTTTGGGGAACAAGAGTGGTACTTTTTCAGTCCAAGAGATAGAAAATACCCAAATGGGGCAAGGCCTAATAGGGCTGCTACATCTGGGTATTGGAAAGCTACTGGAACTGATAAGCCTATATTAACATGTGATGGACATGTGAAAGTTGGAGTAAAGAAAGCACTTGTTTTTTATGGAGGAAAGCCACCAAAAGGAGTTAAAACTAATTGGATTATGCATGAATATAGGTTGATTACTGATCACAATAACAATAATAGTTCTTATAATGCAGCATCAAAAACTCCTTCTCTGGTTGGGGTTGATCATCCTCCAAGCAATAATAAGAAGAATTCTCTCAGGCTTGATGATTGGGTTTTGTGTCGAATATACAAGAAAAACAACAGTAGCACTATGCCAAGGCCACCTCTAATGGATCAATATGATAAAGACCTTTCAATGGAACAAACATATAACATGCAACATAACTCTAAGCCTCCATCTTCAAGAAGCACAAGTTATGGACTTGAAAATGATGACAATTTCTTTGATGGAATTTTAGCATCTGAACATCATCATCATCATCAGGGAATGCAAAATTGTGACATGAACTCAAAGGGTGATGATAATAATAATAACAATAATAGTGATACGTTCCCTATGAAACGTGCACTAAATGGATCATCATCACAGTTTTGGAATGAAACAGGTTCACCAGGGTCATCTTCTTCAAGCAAGCGATTCCATGGAGATCTTAATAGTGGAATAAGCAGTAATGCTGAGGAAAATAATTCTTTTGTTTCTTTGCTTAGCCAGCTTCCACCAAATGCAACGTTTCATCAAAACTCTATTCTTGGAGATGGTGTAATGAGGCAACAATTTCAACTTCCAGACATAAATTGGAATTAA 1080 0.387 MDSTDSSSCSHHPHLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEIDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTCDGHVKVGVKKALVFYGGKPPKGVKTNWIMHEYRLITDHNNNNSSYNAASKTPSLVGVDHPPSNNKKNSLRLDDWVLCRIYKKNNSSTMPRPPLMDQYDKDLSMEQTYNMQHNSKPPSSRSTSYGLENDDNFFDGILASEHHHHHQGMQNCDMNSKGDDNNNNNNSDTFPMKRALNGSSSQFWNETGSPGSSSSSKRFHGDLNSGISSNAEENNSFVSLLSQLPPNATFHQNSILGDGVMRQQFQLPDINWN* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2561 359 PANTHER NAC TRANSCRIPTION FACTOR 56-LIKE 1 337 - -
Psa7g2561 359 Gene3D NAC domain 24 195 IPR036093 GO:0003677|GO:0006355
Psa7g2561 359 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Psa7g2561 359 ProSiteProfiles NAC domain profile. 15 190 IPR003441 GO:0003677|GO:0006355
Psa7g2561 359 SUPERFAMILY NAC domain 11 190 IPR036093 GO:0003677|GO:0006355
Psa7g2561 359 PANTHER NAC TRANSCRIPTION FACTOR 56 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2561 Psa-Chr7 183743201 183745170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2561 5 359 NAC Transcription Factor Family AT1G61110 53.825 1.43e-112 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Psa7g2561 NAM 3.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2561 - - gmx:100797132 488.034