Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2518 ATGCGCAATTTCAATTTCTTCCACCGTTTCTCCAAAACCTTCCGTGACTACGATTCCCAGTTCAAGCTTGTTCTCCTCTGCACCACCGTAAGTGGCGGTGGCCTTTTGGCATACGGTGAGGCTGTTGCTACATCTGAAGCGGCGGTACCTGAGAAGAAAAAGGTGTTGGTGCTGGGAACTGGTTGGGCAGGAACGAGTTTCTTGAGGAATCTTAATGATCCTCGATATGAGGTTCACGTTGTCTCTCCTCGGAATTATTTTGCATTCACTCCTTTGCTGCCCAGTGTTACCTGTGGCACCATCGAGGCTCGCAGCATTGTTGAACCCGTCCGCAATATCTTCAGGAAGAAACATGTGGACTCTCGATTCAGTGAAGCAGAATGTATCAAGATTGATGCAGTAAACAGAAAAGTTTACTGTCGAGCTAATATTAACAATAATTCGAATGAAAAAGATGAATTCGTTGTGGACTATGACTACTTAATCATAGCTGTGGGGGCTAATGTCAACACATTTAATACTCCTGGAGTCACGGAGAATTGTCATTTCTTGAAGGAAGTTGAAGATGCGCAGAGGATTAGAAGAACTGTAATTGACTGCTTTGAGAGAGCAAGTTTGCCTAGTGTAAGTGATGAAGAAAAAAAGAGAATTCTTCATTTTGCTATTGTTGGAGGTGGTCCAACTGGAGTGGAGTTTGCAGCCGCACTTCATGATTTTGTCAGTGAGGATTTGGTCAAATTATATCCCGGGGTAAAAGATTTATTTAAAATTACCCTTCTGGAGGCTGGAGGTCATATCTTGAGCATGTTTGACAAAAGAATAACAGCTTTTGCTGAAGATAAGTTCCGCAGAGATGGTATTGATGTGAAAACAGGATCCATGGTTGTGAAGGTATCTGACAGAGAAATTTCCACTAAAGAAATGAAAAGTGGAGAAATGACTTCAATTCCATATGGAATGGCTGTCTGGTCAACTGGTATTGGCACTCGTCCATTCATAAAAGATTTTATGACACAAATTGGTCAGATTAACAGACGTGCCGTAGCTACTGATGAATGGTTGAGAGTTGAGGGAACCAATAATGTGTATGCGCTTGGTGATTGTGCTACAATAAACCAGCGAAAAGTCATGGAAGATATTGTGGCAATATTTAAGAAGACTGATGCAGACAACTCAGGAACAATTACGCTCAAAGAATTTCAGGCGGTAATGGATGACATCTTTGAAAGATACCCTCAAGTGGAGCTATTCCTAAAGAATAAACAGATGCATGGCATTGCTGATCTTTTGGAAGAATCCAAAGGAGATGTTGAAAAAGAATCTATTGAAATTAATATCGAAGAACTCAAAACTGCACTTTTCAATGTGGACTCGCAGATGAAATTTCTTCCTGCTACAGCTCAGGTTGCATCTCAGCAAGGAGCCTACCTGGCCAAGTGTTTTAACCGGATGGAAGAGTGTGAAAAAAACCCAGAGGGTCCTATTAGGTTCAGGGAAGAAGGTCGTCATCGGTTCAAACCCTTCAGGTACAAGCATTTAGGTCAATTTGCTCCTCTGGGAGGAGAACAGACAGCTGCACAGCTACCTGGAGATTGGGTTTCAATTGGACACAGCAGTCAATGGCTGTGGTATTCTGTCTATGCAAGCAAGCAAGTCAGCTGGCGCACAAGGGCATTAGTGGTGTCAGACTGGATGAGACGCTTTATTTTTGGGAGGGACTCGAGTCAAATCTGA 1734 0.4268 MRNFNFFHRFSKTFRDYDSQFKLVLLCTTVSGGGLLAYGEAVATSEAAVPEKKKVLVLGTGWAGTSFLRNLNDPRYEVHVVSPRNYFAFTPLLPSVTCGTIEARSIVEPVRNIFRKKHVDSRFSEAECIKIDAVNRKVYCRANINNNSNEKDEFVVDYDYLIIAVGANVNTFNTPGVTENCHFLKEVEDAQRIRRTVIDCFERASLPSVSDEEKKRILHFAIVGGGPTGVEFAAALHDFVSEDLVKLYPGVKDLFKITLLEAGGHILSMFDKRITAFAEDKFRRDGIDVKTGSMVVKVSDREISTKEMKSGEMTSIPYGMAVWSTGIGTRPFIKDFMTQIGQINRRAVATDEWLRVEGTNNVYALGDCATINQRKVMEDIVAIFKKTDADNSGTITLKEFQAVMDDIFERYPQVELFLKNKQMHGIADLLEESKGDVEKESIEINIEELKTALFNVDSQMKFLPATAQVASQQGAYLAKCFNRMEECEKNPEGPIRFREEGRHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWMRRFIFGRDSSQI* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2518 577 Gene3D - 427 576 - -
Psa7g2518 577 Gene3D - 43 409 - -
Psa7g2518 577 SUPERFAMILY FAD/NAD(P)-binding domain 214 372 IPR036188 -
Psa7g2518 577 SMART efh_1 379 407 IPR002048 GO:0005509
Psa7g2518 577 SUPERFAMILY FAD/NAD(P)-binding domain 52 271 IPR036188 -
Psa7g2518 577 SUPERFAMILY EF-hand 369 463 IPR011992 -
Psa7g2518 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 28 47 - -
Psa7g2518 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 158 176 - -
Psa7g2518 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 219 237 - -
Psa7g2518 577 PANTHER NADH DEHYDROGENASE 4 577 IPR045024 GO:0003954|GO:0006116
Psa7g2518 577 Pfam Pyridine nucleotide-disulphide oxidoreductase 53 378 IPR023753 GO:0016491
Psa7g2518 577 ProSitePatterns EF-hand calcium-binding domain. 388 400 IPR018247 -
Psa7g2518 577 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Psa7g2518 577 PANTHER NAD(P)H DEHYDROGENASE B2 4 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2518 Psa-Chr7 178912020 178916519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2518 1 577 EF-hand Containing Proteins AT4G05020 69.936 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2518 K03885 - gmx:100809915 1018.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2518 7 178912020 178916519 Psa1g4778 1 359033421 359039215 PCT