Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2514 ATGAAATTAAATACTGAATTAACAGCAGGTCCTATTGTTAACATCGCTGTTGTGCTTGGAATTAATTTGGTTTCTGCTGGATCGGGTGTTGCTTTTGATGTTGCCACTAGCGACTTTATCAAGTACAATGCAGAGTCAAATGTTGCTCATGCTAACCTTATTGCATCTAGAATTCTCAAGACCAGAGATTCAAGTTCAGCAGGCTGTGCCGGCACCTTCGAACAACATTCCCGCTCCGGACATAAATATTTTGTAAAGAATTTGGACAAGACAGTTGATTCCAAGGATTTGTATGACACTTTTTCTACTGTTGGAAACATTCTATTTTGCAAAATGGCTACCGTTGGTTCTGGCCAGTCTAAAGGCTTTGACTTTGCCTAA 381 0.399 MKLNTELTAGPIVNIAVVLGINLVSAGSGVAFDVATSDFIKYNAESNVAHANLIASRILKTRDSSSAGCAGTFEQHSRSGHKYFVKNLDKTVDSKDLYDTFSTVGNILFCKMATVGSGQSKGFDFA* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2514 126 PANTHER POLYADENYLATE-BINDING PROTEIN 82 125 - -
Psa7g2514 126 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 84 123 IPR000504 GO:0003723
Psa7g2514 126 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 81 126 IPR000504 GO:0003723
Psa7g2514 126 PANTHER RNA BINDING PROTEIN 82 125 - -
Psa7g2514 126 SUPERFAMILY RNA-binding domain, RBD 73 123 IPR035979 GO:0003676
Psa7g2514 126 Gene3D - 72 126 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2514 Psa-Chr7 178338107 178338487 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2514 78 125 Eukaryotic Initiation Factors Gene Family AT4G34110 57.143 1.09e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2514 K13126 - psom:113346681 66.2402