Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2492 ATGCAGATTGCTCTCAAGCAACCACCTAAACCTATAGCTGAGATGCCTTCTAGTGAGACTATAGGCTTAGACTTGATGGTCCACAAAGTATGGAATTCTCTTGAGGATGACACTGTTGGTGTAATCGGTTTATATGGAATGGGTGGGGCCGGAAAAACAACCCTTATGAAAAGAATTCACAATGAATTAGGAACGAGGGAGCATAGTTTTGATCTAGTGTTATGGATAGTGGTTTCTAGAGATTCTGATATCAATAAATTAATGAATGACATCAGCAATAAATTAGGAATTGAGGAAGGTTTTTGGAATAGAAGTACTCAAGACCAAAGAGTATCAAAGATTTATGACCGGTTAAAAGGAAAAAAGTTTTTGTTGATGTTGGATGATCTGTGGGAAAAGCTGGAACTAGACACAATAGGAGTTCCAGTTCAGAAAGAAAATAGCAACAAATCAAAAGTAATGTTCACAACACGGTTTGAAGACGTGTGTGGTAAAATGCAAGCTCAAAATAAATTCAAAGTGGAATGTTTATCAGAGAAAGAAGCCTTTGATTTGTTTTGTAAGAAAGTAGGTCATGAGACTTTAAAATGCCACACAGAGATTCCAAAGCTAGCAGATGAAATGGCTAAAGAATGCGGAGGATTGCCGCTAGCATTAATCACTGTGGGAAGTGCCATGGCTGGAGTGAGCAGTTTTGAAGCTTGGATGGTTGCGAAAAATAATTTGAGGAGTTCTTCTTGGACAACCTCGGATTTAAAGGATAAAGTTTTTCGTATCCTCAAGTTTAGCTACGACAAACTTCCAGATGAGGCACATAAAAGGTGTTTCCTGTACTGTGCATTATACCCGGAAGATTTTGAAATAGGCATCGATGACCTTATTGATCGATGGATCGGTGAGGGATTTCTTTGTAGAGATGCTATGAGTATATATGATATGCACATTCAAGGGAAGTCAATTATTGAAAAATTAATACTTTCATGCCTATTAGAAGAGAGTATTGACATTGAATCTTTCCATTATCTTGAGAGGAATAATAGGAGAATTAAGATGCATGATGTGATTAGAGATATGGCACTATGGTTAGCACGAGATGAAGACGAAAACAAAGACAAAGTTGTAGTTCAGGGGGAAGTATTTTCCATTTCAAAAATGGATTCTAAAAGGTTGAGTGTTGTAGAGAGGATTTCAATAATAACTGCTACAAAATTTTCAGGAAACTACGATCTACCGGCTTGTCCAAATCTCACCACTGTTTGTTTTAGCTTTCATGGGGTTTTCAACACCTCTAATAATCTTTCATCAGCAAATTTCCAATCCCTGAAACGTTTGAGAGTGTTGGATTTATCATATACTCGTTATATTGTTCTACTCCCCCCTGAAATAGGTGAATTAATCAACTTGGAGTTCCTTAACATTTCAGGAACATTTGTTTCTTCGTTTCCCATTGAATTCATGAAGTTGAAAAATTTGAAGGTATTTCTTATGGACGATATGAAAGCCTTTGATGGTGAAGTCAGTCCATTGGCAGTGATAGAAAGTCTTGAACAATTAAAAGTGTTTAGATTTAGTAGACCCCACGGCACGGTACAAGAAGATATATCATTACTTGAGAAGCTGGAATCCTTACCAAAAATGGAGGAATTGAGCCTGCAATTAACTGGCATCACTAGTATGCAGAGACTATTTAACTCCGCCAAACTACGAGGTTGCTCTCGACGTCTTAGGCTTTCTAATTATGAGCTAGACACAGTTGAAATGTCATCATTATTAGCATCCATGTCAGAAATGACTCATTTGGAATGCATACATCTTATAATGATACGCAGCCTCGTGGATGGTTCATCGGTTACTGAGAAATGCCATCTTGGCAAGCTTCGACAAGTGCGCATACATTTCTGTAGTTCGATTACTCATTTGACCTGGTTGAGGTATGCTCCACTTCTCGAGTATCTTGTTGTTATTTATTGTAGTTCAATTGAACATGTGGTGAAGGAAGCCAAAGATGACGAAGAATTTGGCTCAGAATCTAAGAATGATAATATATTCACAAATCTTAAAGATCTTTGCCTTGAAAATATGCCAAAGCTAGTGAGCATTCACAAAAGAGCTTTGGCTTTTCCTTCCTTAAAACGTATTCGTGTAACTGATTGCCCCAATCTGAGGAAGCTTCCTTTCAACTCCAGCTTTGCTTCAAAGGACAACTTGGTTGCAATCCAAGGAAGGACCAACTGGTGGGACAATTTAGAGTGGGATGACTCAATTATTGAACCCTTACTACGTCCTAAATTTCAACAAAGCTAG 2304 0.3785 MQIALKQPPKPIAEMPSSETIGLDLMVHKVWNSLEDDTVGVIGLYGMGGAGKTTLMKRIHNELGTREHSFDLVLWIVVSRDSDINKLMNDISNKLGIEEGFWNRSTQDQRVSKIYDRLKGKKFLLMLDDLWEKLELDTIGVPVQKENSNKSKVMFTTRFEDVCGKMQAQNKFKVECLSEKEAFDLFCKKVGHETLKCHTEIPKLADEMAKECGGLPLALITVGSAMAGVSSFEAWMVAKNNLRSSSWTTSDLKDKVFRILKFSYDKLPDEAHKRCFLYCALYPEDFEIGIDDLIDRWIGEGFLCRDAMSIYDMHIQGKSIIEKLILSCLLEESIDIESFHYLERNNRRIKMHDVIRDMALWLARDEDENKDKVVVQGEVFSISKMDSKRLSVVERISIITATKFSGNYDLPACPNLTTVCFSFHGVFNTSNNLSSANFQSLKRLRVLDLSYTRYIVLLPPEIGELINLEFLNISGTFVSSFPIEFMKLKNLKVFLMDDMKAFDGEVSPLAVIESLEQLKVFRFSRPHGTVQEDISLLEKLESLPKMEELSLQLTGITSMQRLFNSAKLRGCSRRLRLSNYELDTVEMSSLLASMSEMTHLECIHLIMIRSLVDGSSVTEKCHLGKLRQVRIHFCSSITHLTWLRYAPLLEYLVVIYCSSIEHVVKEAKDDEEFGSESKNDNIFTNLKDLCLENMPKLVSIHKRALAFPSLKRIRVTDCPNLRKLPFNSSFASKDNLVAIQGRTNWWDNLEWDDSIIEPLLRPKFQQS* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2492 767 SUPERFAMILY L domain-like 350 748 - -
Psa7g2492 767 Gene3D Ribonuclease Inhibitor 574 740 IPR032675 -
Psa7g2492 767 PRINTS Disease resistance protein signature 41 56 - -
Psa7g2492 767 PRINTS Disease resistance protein signature 117 131 - -
Psa7g2492 767 PRINTS Disease resistance protein signature 212 226 - -
Psa7g2492 767 PRINTS Disease resistance protein signature 439 455 - -
Psa7g2492 767 CDD AAA 21 146 - -
Psa7g2492 767 Gene3D - 264 360 IPR036388 -
Psa7g2492 767 PANTHER DISEASE RESISTANCE PROTEIN RP 16 757 IPR044974 GO:0006952
Psa7g2492 767 Gene3D Ribonuclease Inhibitor 364 573 IPR032675 -
Psa7g2492 767 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 279 IPR027417 -
Psa7g2492 767 Pfam NB-ARC domain 26 265 IPR002182 GO:0043531
Psa7g2492 767 Gene3D - 177 263 IPR042197 -
Psa7g2492 767 PANTHER OS12G0491200 PROTEIN 16 757 - -
Psa7g2492 767 Gene3D - 10 176 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2492 Psa-Chr7 176421824 176424519 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2492 39 359 WRKY Transcription Factor Family AT5G45050 22.866 1.05e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2492 - K13459 mtr:MTR_4g091380 1018.45