Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2489 ATGGAAGCGTTGGGTGTAATATGGGAAGTTGCTAAAAGTTTGTTCAGTTGCACAAATGCACAAGCTGCCTATGTTTATAAGCTGCAGGAGAATCTGGAATCATTGATGGAAAAATGGGAAGATCTTCAAAACAAGAAAAAGGATGTGCAAACAGAAATTGATAGAGCTGAGAGCACAGGACTCATGAAAAGAACAAACGAAGTGATTGGTTGGCTACATGAATTTCTAAAACTTGAAGAGAAAATGAAAGATACTCCCAGTTCTCAAGAAGTTCAAAGTAACCAATGTCTGAATGGTTATTGCCCAAAGAACATTGTGTCAAGCTACAAGTTAGGGAAAACAATTGTTAAGAGGCTCAATGAGGTAAATGGCCTTCTTGCTAGAGCTGGTAATATGCAGATTGCTCTCAAGCAACCACCTAAACCTATAGATGAGATGCCTTCTAGTGAGACTATAGGCTTAGACTTGATGGTCCACAAAGTATGGAATTCTCTTGAGGATGACACTGTTGGTGTAATCGGTTTATATGGAATGGGTGGGGCCGGAAAAACAACCCTTATGAAAAGAATTCACAATGAATTAGGAACGAGGGAGCATAGTTTTGATCTAGTGTTATGGATAGTGGTTTCTAGAGATTCTGATATCAATAAGTTAATGAATGACATCAGCAATAAATTAGGAATTGAGGAAGGTTTTTGGAATAGAAGTACTCAAGATCAAAGAGTATCAAAGATTTATGACCGGTTAAAAGGAAAAAAGTTTTTGCTGATGTTAGATGATTTGTGGGGAAAGCTAGAACTAGAAGCAATAGGAGTTCCTGATCCGGAAAAAAATAACAAATCAAAAGTAATGTTCACAACACGATCTGAAGATGTGTGTGGTAAAATGCAAGCTCAGAAGAAACTCAAAGTGGAATGTTTATCAGATGAAGAAGCATTTGATTTGTTTTGTAAGAAAGTAGGTGATGAGACTTTAAAATGTCACTCAGAGATCCCAAAGCTAGCGCGTGAAATGGCTAAAGAATGCAGAGGATTGCCGCTAGCATTAATCACTGTGGGAAGTGCCATGGCTGGAGTGGGCAGTTTTGAAGCTTGGATGGTTGCGAAAAATAACTTGAGGAGTTCTCATTGGACAGCCTCAGATTTTGAGGATAAAGTTTTTCATATCCTCAAGTTTAGCTACGACAAACTTCCTGATGAGGCGCATAAAAACTGCTTCTTGTACTGTGCACTATACCCAGAAGATTTTGAAATAGACACTGATGACCTTATTGATCGATGGATCGCTGAGGGATTTCTCTATGATGATATCAGTATATATGATATGTACAACCAAGGGAAGTCTGTTGTTGAGAAATTAATACTTTCATGCCTATTAGAAGAGAGTATCGAATCTTTTCATTTTGGTTGGAGGAATAATAGGATAATTAAGATGCATGATGTGATTAGAGATATGGCACTATGGTTAGCTCGAGATGAAGACAAAAACAAAGACAAAGTTTTAGTTCAGGGGGAAGTATTTTCCATGTCAAAAATGGATTCTAAAAGATTGAATGCTATAGAGAGGATTTCAATAATAATTACAGAGAGTTTAGATGAAAATTGGAATTTTCTGGCTTGTCCAAATCTCATCACTCTTTTCTTTAGCATTCGATACTTGTTTGTCCGTCATAATCCTTTTTTTTCAACAAATTTCCAATCATTGAAAAGGTTGAGAGTGTTGGATTTATCATATACTACATCTCTTGAGGTAATCTCCCCTAAAATAGGTGAGGTAATCAACTTGGAGTTCCTTAACATTTCTGGAACATCAGTATCTTCGTTTCCGATTGAATTGAAGAAGTTGAAAAATTTGAGGGTATTCCTTATGGAATATATGAAACGCTTTTCTATAAATATTTTTTCAATTGCAGTGATAGAAAGTCTTGAACAATTAAAGGTGTTTAGATATAGCAAAGAATATGCAATTATTGAACAAGGAGGCATATCATTACTAGAGAAACTGGAATCCTTACCAAATTTGGAGGAACTGGGCATTCAATTAACTAGCTTCATTAGTGTGCAAAGACTATTTCGCTCCACCAAATTACGAGGTTGCTCTCGACATCTTAGGCTTAGATTGAATGAGAAAGACACAGTTGAAATGTCATCATTATTAGCATCCATATCAGAAATGACTCATTTGGACTACATATATCTTTCAGGACAATACAGCCTTGTGGATGGTTCATCGGTTACTCAGAAGTGCCATCTTGGCAAGCTTCGACAAGTGCACATAGTTGTTTGTTTTTCAATTACTCATTTGACCTGGTTGAGGTATGCTCCACTTCTCGAGTATCTTGGTGTTTATGCTTGTTTTTCAGTTGAACATATTGTGAAGGAAGCCAAAGATGACGAAGATGTTGGCTCAGAATCTAAGAATGATAATATGTTCATAAATCTTAAAGAACTTCTCCTTTCAAAAATTCCAAAGCTAGTGAGCATTCACAAAAGAGCATTGGCTTTTCCTTCCTTAAAACGTATTCGTGTAAAAGATTGCCCCAATCTGAGGAAGCTTCCTTTAAACTCCAGCTTTGCATCAAAGAACAACTTGGTTGCAATCGTAGGAGATACCGAGTGGTGGGACAAGTTAGAGTGGGATGACACAATCATTGAACACTTACTACGTCCTAAATTTCAACAAGACTAG 2688 0.3687 MEALGVIWEVAKSLFSCTNAQAAYVYKLQENLESLMEKWEDLQNKKKDVQTEIDRAESTGLMKRTNEVIGWLHEFLKLEEKMKDTPSSQEVQSNQCLNGYCPKNIVSSYKLGKTIVKRLNEVNGLLARAGNMQIALKQPPKPIDEMPSSETIGLDLMVHKVWNSLEDDTVGVIGLYGMGGAGKTTLMKRIHNELGTREHSFDLVLWIVVSRDSDINKLMNDISNKLGIEEGFWNRSTQDQRVSKIYDRLKGKKFLLMLDDLWGKLELEAIGVPDPEKNNKSKVMFTTRSEDVCGKMQAQKKLKVECLSDEEAFDLFCKKVGDETLKCHSEIPKLAREMAKECRGLPLALITVGSAMAGVGSFEAWMVAKNNLRSSHWTASDFEDKVFHILKFSYDKLPDEAHKNCFLYCALYPEDFEIDTDDLIDRWIAEGFLYDDISIYDMYNQGKSVVEKLILSCLLEESIESFHFGWRNNRIIKMHDVIRDMALWLARDEDKNKDKVLVQGEVFSMSKMDSKRLNAIERISIIITESLDENWNFLACPNLITLFFSIRYLFVRHNPFFSTNFQSLKRLRVLDLSYTTSLEVISPKIGEVINLEFLNISGTSVSSFPIELKKLKNLRVFLMEYMKRFSINIFSIAVIESLEQLKVFRYSKEYAIIEQGGISLLEKLESLPNLEELGIQLTSFISVQRLFRSTKLRGCSRHLRLRLNEKDTVEMSSLLASISEMTHLDYIYLSGQYSLVDGSSVTQKCHLGKLRQVHIVVCFSITHLTWLRYAPLLEYLGVYACFSVEHIVKEAKDDEDVGSESKNDNMFINLKELLLSKIPKLVSIHKRALAFPSLKRIRVKDCPNLRKLPLNSSFASKNNLVAIVGDTEWWDKLEWDDTIIEHLLRPKFQQD* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2489 895 PANTHER DISEASE RESISTANCE PROTEIN RP 13 885 IPR044974 GO:0006952
Psa7g2489 895 Coils Coil 25 59 - -
Psa7g2489 895 Gene3D - 140 306 IPR027417 -
Psa7g2489 895 Gene3D Ribonuclease Inhibitor 502 881 IPR032675 -
Psa7g2489 895 CDD AAA 152 287 - -
Psa7g2489 895 Gene3D - 394 487 IPR036388 -
Psa7g2489 895 PANTHER OS12G0491200 PROTEIN 13 885 - -
Psa7g2489 895 Pfam NB-ARC domain 157 395 IPR002182 GO:0043531
Psa7g2489 895 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 409 IPR027417 -
Psa7g2489 895 SUPERFAMILY L domain-like 477 864 - -
Psa7g2489 895 Gene3D - 307 393 IPR042197 -
Psa7g2489 895 PRINTS Disease resistance protein signature 172 187 - -
Psa7g2489 895 PRINTS Disease resistance protein signature 248 262 - -
Psa7g2489 895 PRINTS Disease resistance protein signature 342 356 - -
Psa7g2489 895 PRINTS Disease resistance protein signature 566 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2489 Psa-Chr7 176351787 176355035 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2489 170 419 WRKY Transcription Factor Family AT5G45050 25.781 1.04e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2489 - K13459 mtr:MTR_4g091380 1199.88