Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2476 ATGGAACAAGTTAATGATAGTAATAGATTATCTGTGTCTCAAGATGAGTTGTTTTCCAATGCTGAACATGACACCAACAATGGAAAACTGAGAAAGAAATACTATAATGAAGATGGCACAAGAGTGTTTGTATCAAAGAATCTTGAGATTGAAAGGAGGAGGAGAGATAAACTTCATTCCAGGCTTTGCACACTTCGTTCTATAATGCTCAAAGAAAGTATTATTGAGGATGCTATTACTTATGTCAAGAAGCTTCAAGATGATGTTAATAAACTCACACAAGAGCTTCAAGCAATGGAGGCAGAAGAAAACTTAGAGCGGAAAATAAACAAAGTTTCTAATGCAGAAGAGATGAAGAAATGGGGGATACAGGAAGAGATTCATGTGGAAAAAACTGATGGGACTAAACTGTGGATTAAGATGATCATTGAGAAAAAGAGAGGGAGGTTCAACAAATTAATGGAAGTTATGAATGATTTATGCATTGAAATGACAGACATTAGTGTTACAACTATAAAAGGAGCATACATGATTACAACTTGCTTAAAGAACTTGGGAGGTGAACCATTTGATGTTGATCAAGCCAAGTATTGGTTGCAAGATATAATCAAGATCATTTAG 621 0.3478 MEQVNDSNRLSVSQDELFSNAEHDTNNGKLRKKYYNEDGTRVFVSKNLEIERRRRDKLHSRLCTLRSIMLKESIIEDAITYVKKLQDDVNKLTQELQAMEAEENLERKINKVSNAEEMKKWGIQEEIHVEKTDGTKLWIKMIIEKKRGRFNKLMEVMNDLCIEMTDISVTTIKGAYMITTCLKNLGGEPFDVDQAKYWLQDIIKII* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2476 206 Gene3D - 44 120 IPR036638 GO:0046983
Psa7g2476 206 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 20 206 - -
Psa7g2476 206 Coils Coil 75 118 - -
Psa7g2476 206 PANTHER TRANSCRIPTION FACTOR DYT1 20 206 - -
Psa7g2476 206 MobiDBLite consensus disorder prediction 1 23 - -
Psa7g2476 206 SMART finulus 48 91 IPR011598 GO:0046983
Psa7g2476 206 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 41 100 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2476 Psa-Chr7 174936556 174937482 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2476 43 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 40.449 1.72e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2476 - - mtr:MTR_4g091910 199.519