Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2467 ATGGGTTTCTTCAGTTTTGACAACTCTTCCAGATACGTTGGGATTTGGTATCATAACGTTCCAGTTTCAGCATACGTGTGGGTTGCAAACAGAGAAAATCCTATAAAAAACAGACAAGGTTCTATTACAATGAAAAGTGATGGTAACTTGGTTGTTCTTGATGGAGAGAACAACGAGGTTTGGTCGAGTAATATATCAGTTTCTATTAAAAACTCACAAGCTGTTCTTCGTAATGATGGAAACCTTGTTCTTTTAGATAGAGAAACTAAAAAAGAGATTTGGCAAACCTTTGAACATCCAACTGATACATATCTTCCTGGTATGAAAGTTCCCGCGAGTAGTGGAAGTGGAAGTGGAAGTGGAATCGGGAAGGATGCTACCTTTCGTGCGTGGAAATCAGACAAGGATCCTTCATTCGGAAACTACACGATGAGTGTTGATTCGGAAGCATCGCCACAGATAGTTATTATGGAAGGAGAGAAAAGAAGGTGGAGAAGTGGTTATTGGGATGGTAGAGTTTTCTCAGGTGTACCAAATATGACAGGAAGTTATCTTTTTGGTTTTAGGCTTAACACGGACGATAAAGGCGAAAGGTATTTTGTCTATGAAGCATTGAATAGTAGTGATAAGATAAGGTTTCAGATTGGTTATGATGGATTTGAGAGACAATTCAGGTGGAATGAAGATGAAAAAGAATGGAATGTGATACAAAGTTTGCCTTACAAGAAGTGTGAGTTTTATAATTCATGTGGTAGTTTTGCAATATGTGATGAGTCTGATTCAGTTTTATGTAAGTGCTTAAAAGGGTTTGAGCCAAAGGATATGATAAGTTGGAAAAATGGGAATTGGTCAAAAGGGTGTAAGAGGATGAATCCACTGAATGGTGAGAGAACTAGTACTAATAGTTCTGTTGGAGAAGATGGTTTTTCGGTGCAAAGGGGTTTGAAGTTGCCTGATTTCGCGCATTTGGTTAATGTTGTTGATAGCAAGGACTGTGAAAGAAATTGTCTGCAGAATAGTTCTTGTACTGCGTACATAAATGCTATTGGATTCGGATGTATGGTTTGGTTTGGAGAGTTAGTTGATGTTCAAAGACTAGAAAACTATGGAAATACACTCAACATTCGGCTCGCTGATTCTGATTTAGATGATGGGAAGAAAAAGACCAAGATTTGGATAACATTAGGTGTTGTAATGGGGCTTATCTGCCTTGGATTCTTTGCATGGCTGCTATGGAGATTTAAGGGAAAACTCAAAGTCTCTTCAACTTCTTCTCCCAACAGAAACATTGGTAATGTGACAGTTGCTGAACCATCCAAGAGTACAAACTTATTACTACCAGCAGAATTTTCAGGATCAGTTGATCATAATTCGGAAGCGAATCCTCTAAATAATGCAGAACTTTCATTCTTCAATTTTAGTAGCATTGTAATAGCAACAAACAATTTCTCAGACGAAAATAAGCTCGGACAAGGAGGATTCGGTCCTGTCTACAAGGGAAAGCTTCCCGGGGGAGAAGAAATCGCGGTTAAGAGGCTTTCTAGAAAGTCTAGCCAAGGTTTAGATGAGTTCAAGAATGAAATGATGCTAATAGCCAAATTACAACATAGAAATCTTGTTAGACTATTAGGATGTTCAATTCTAGAGGAAGAGAAGTTACTGGTATATGAATACATGCCAAACAAAAGTTTGGACTTCTTTTTATTTGACAAAGCTAAAAGATCCACACTAGACTGGCAAACGCGCTTCAACATTATATGCGGAATAGCTAGAGGACTTCTTTATCTTCACCAAGATTCGAGATTTAGAATTATCCATAGAGATCTTAAGGCAAGCAACATTCTACTTGATCGAGAGATGAACCCAAAAATATCAGACTTCGGGATGGCTAGAATTTTTGGCACGAATCAGACAGAGGCAAATACAGTTAGAGTCGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGGATGGAATCTTCTCAGTGAAATCAGATGTTTTCAGTTTTGGCGTACTTGTGATGGAGATCATAAGTGGAAAAAAGAACCGAGGTTTCTATTCTGCAAGCAAAGAATTGAATCTTCTTGGTCATAGTTGGAAGCTGTGGAAAGAAGGAAATGCTTTGGAACTAATTGATTCGTCCATTATTGATAATTCATATTTATCATCTGAGGTTCTTAGATGCATACAAGTTGGATTATTATGCGTACAAGAGAGAGCAGAAGATAGACCAACAATGTCTTCAGTGGTTTTGATGTTGAGTAGTGAAACAGCAACAATAGCACAACCCAAGAACCCTGGATTTTGCCTAGGAAGCAATCCTATTGAAACTGATTCTTCATCAAGTAAACAAGATGAATCTTGCTCTGTGAACCATGTTACTGTCACAATGGTAGATGGCAGATAG 2412 0.3806 MGFFSFDNSSRYVGIWYHNVPVSAYVWVANRENPIKNRQGSITMKSDGNLVVLDGENNEVWSSNISVSIKNSQAVLRNDGNLVLLDRETKKEIWQTFEHPTDTYLPGMKVPASSGSGSGSGIGKDATFRAWKSDKDPSFGNYTMSVDSEASPQIVIMEGEKRRWRSGYWDGRVFSGVPNMTGSYLFGFRLNTDDKGERYFVYEALNSSDKIRFQIGYDGFERQFRWNEDEKEWNVIQSLPYKKCEFYNSCGSFAICDESDSVLCKCLKGFEPKDMISWKNGNWSKGCKRMNPLNGERTSTNSSVGEDGFSVQRGLKLPDFAHLVNVVDSKDCERNCLQNSSCTAYINAIGFGCMVWFGELVDVQRLENYGNTLNIRLADSDLDDGKKKTKIWITLGVVMGLICLGFFAWLLWRFKGKLKVSSTSSPNRNIGNVTVAEPSKSTNLLLPAEFSGSVDHNSEANPLNNAELSFFNFSSIVIATNNFSDENKLGQGGFGPVYKGKLPGGEEIAVKRLSRKSSQGLDEFKNEMMLIAKLQHRNLVRLLGCSILEEEKLLVYEYMPNKSLDFFLFDKAKRSTLDWQTRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDREMNPKISDFGMARIFGTNQTEANTVRVVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVMEIISGKKNRGFYSASKELNLLGHSWKLWKEGNALELIDSSIIDNSYLSSEVLRCIQVGLLCVQERAEDRPTMSSVVLMLSSETATIAQPKNPGFCLGSNPIETDSSSSKQDESCSVNHVTVTMVDGR* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2467 803 CDD PAN_AP_plant 302 378 - -
Psa7g2467 803 SUPERFAMILY alpha-D-mannose-specific plant lectins 11 169 IPR036426 -
Psa7g2467 803 Gene3D Transferase(Phosphotransferase) domain 1 559 767 - -
Psa7g2467 803 Gene3D - 1 97 IPR036426 -
Psa7g2467 803 ProSiteProfiles Bulb-type lectin domain profile. 1 97 IPR001480 -
Psa7g2467 803 ProSiteProfiles PAN/Apple domain profile. 304 378 IPR003609 -
Psa7g2467 803 Pfam S-locus glycoprotein domain 164 273 IPR000858 GO:0048544
Psa7g2467 803 Pfam D-mannose binding lectin 25 116 IPR001480 -
Psa7g2467 803 SMART ntp_6 304 377 IPR003609 -
Psa7g2467 803 SUPERFAMILY Protein kinase-like (PK-like) 463 755 IPR011009 -
Psa7g2467 803 SMART blect_4 1 100 IPR001480 -
Psa7g2467 803 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 1 803 - -
Psa7g2467 803 PIRSF SRK 1 803 IPR024171 GO:0004674
Psa7g2467 803 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 803 - -
Psa7g2467 803 Pfam PAN-like domain 305 363 IPR003609 -
Psa7g2467 803 SMART serkin_6 483 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2467 803 CDD STKc_IRAK 489 755 - -
Psa7g2467 803 ProSiteProfiles Protein kinase domain profile. 483 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2467 803 Pfam Domain of unknown function (DUF3403) 757 803 IPR021820 GO:0004674
Psa7g2467 803 Pfam Protein tyrosine and serine/threonine kinase 486 753 IPR001245 GO:0004672|GO:0006468
Psa7g2467 803 CDD B_lectin 1 100 IPR001480 -
Psa7g2467 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Psa7g2467 803 Gene3D Phosphorylase Kinase; domain 1 450 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2467 Psa-Chr7 174205584 174240271 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2467 471 798 Receptor kinase-like Gene Family AT4G11530 59.760 1.31e-135 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa7g2467 PK_Tyr_Ser-Thr 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2467 - - mtr:MTR_4g091570 1165.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2467 7 174205584 174240271 Psa1g4817 1 360644015 360647124 PCT