Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2466 ATGGACTCTGCCAAAATTCTTCTCTATCTTGTTACAGCCCAAAATCATAAACACAAGTTTTGGTTGCTTATAAACTCTTTGATTCTTCTCCTTCTTAACTTCTCTTTTTCCTCTTGTTCTTCTGATACCATATCTACTGACAAACCTATAAGAGATGGTGAGCTTCTTGTTTCTGAATCTAAAACCTTTGCTCTTGGATTCTTCACTCCCGGAAAGTCCACCTCTCGCTATGTTGGAATTTGGTACTACAATTTGCCAATCCAAACTGTTGTTTGGGTTGCAAATAGAGATACTCCAATCAATGACACTTCTGGAATTCTATCAATCGACCCGACTGGAAATCTAGTACTCCACCACAACCTCAGCACCATTCCCATTTGGGCTACCGATGTTTCTAATGGTGTAAGTGTCTCTTTATCGTGGTTGCAACATCGAGTTGATAGCGATATAGCAAACTTTGTTCTGATGTTAAACAACACCAAAACTGTCATCTGGGAAAGCTTTGATCATCCAACAGACACCATGCTTCCATATCTAAAGGTTGGTTTTGATAGAAAAACTAATCAAAGCTGGTTCCTTCAATCATGGAAGACAGATGAGGACCCTGGAAAAGGTGCGTTTACTTTTAAATTCAGCACCATTGGCAAACCTCAGGTGTTTATGTACAACCGGAACCTTCCTTGGTGGCGTGGTGGACCATGGAATGGAGAACTATTTGCAGGTGTACCTAATATGAAACGAGATATGGTGACTTTTAACGTTTCTTATGTTGAAGATGACAACTATTCAGCACTCTCATTTAACATGTTTGATAAGTCTGTCATTACTAGGATAGTGATTCAGCAATCTGGTTTCTTTCAAGCATTCACGTGGGACAGTCAAAAGAGTCAATGGAGCCGGTACTGGTCTGTACCAACAGACCAATGTGATAACTATGGAACATGTGGATCAAACAGTAATTGTGACCCTTTGAACTTTGACGACTTTAAGTGTACTTGTTTACTTGGTTTTGAACCAAAATTTCCACGTGATTGGTATGAGAGTAGAGATGGGTCAGGAGGGTGTGTTAGGAATAAAAATGCATCTGTTTGTAGGAATGGAGAAGGGTTTGTGAAAGTTGTAAGCTTAAAAGTTCCCGATACATCTGTGGCAGTTGTTAAAGGTGGTTTAAGTTTGGAAGAATGTGAGAAAGAATGCTTGAGAAACTGCTCTTGTGCTGCCTATGCACCTGCTGATGTGAGGAATGGTGGAAGTGGTTGTTTGGCATGGTATGGGGATTTAATGGACATTCAAAAACTTAGTGATCAAGGCCAAGATTTGTTTTTACGCGTCGATAAAGTTGAACTAGCTAATTACTACAAAAAAAGCAAAGGAGTCTTTGATAAAAAGAGGATGGCTGCAATTCTGGTAGCTTCTACAGTTGCCATTGTCCTCCTCTTTTCCTATATGTATTGCATGTGGAATAAAAGAAGAAAAGATAAAATGATGCAACAATTAAACCAAGATTCCTCCGGAGAAGAGAACGGTGCTCAAAGCAACACACATCCAAATCTACCCTTTTTCAGCTTTAGAACGATAACAGCGGCTACAAGAAATTTTAGTAATGAGAATAAGCTAGGGCAAGGTGGATTTGGTTCTGTCTATAAGGGTTGCTTAGTCAATGGACAAGAGATAGCAGTAAAAAGATTGTCAAAAGATTCAGGTCAAGGCAAAAGAGAGTTTAAAAATGAAGTGACACTTCTAGTAAAACTTCAACACAGGAATTTAGTGAAGTTGCTTGGTTGTTGCTTTGAGAAAAAAGAAAGAATGCTAGTTTACGAATACCTACCGAACAAAAGTCTAGATTTCTTTATATTTGATCAAAACCAAAGGTCATCATTGGGTTGGGGTAAGCGTTTTGAACTTATTTGTGGGATTGCTCGAGGTGTTTTATATCTTCATCAAGATTCAAGGCTGAAAATAATTCATAGAGATCTAAAAGCCGGCAATGTTCTCCTTGATGCTGCAATGAATCCCAAAATCTCAGATTTTGGTATGGCTAGAATATTTGGAGAAGATGAAATCCAAGCAAGAACAAAAAGAGTGGTCGGAACATATGGATATATGGCACCAGAATATGCAATGGAAGGACGATATTCAACAAAATCTGATGTCTTCAGCTACGGGGTCTTGCTACTAGAAATCATTGCTGGCCAAAGAAACACTCATTGTGAAATAGGAAGAACCTCCCCAAATTTAATTGGACATGTGTGGACACTATGGACGGAAGGAAAAGCCTTGGATATAGTTGATCTAGCACTAAACCAGTCTTATCCTCCTGATATAGTTCTGAAATGCATTCAAATTGGACTCTTGTGTGTGCAAGAAAATGCCATGAATAGACCACCAATGCTAGAAGTTGTTTTGATGCTAGCCAATGAAACACCTCTCTCCCCACCTCAAAAACCTGCATTTTTATTAATTGGAAACCAAGTTTTGCAAGAGTCTTCAACATCAGGAGGAAGTTCTTCAATAAATGAATTAACAGAAACTACCATCAGTGCTCGTTAA 2550 0.3882 MDSAKILLYLVTAQNHKHKFWLLINSLILLLLNFSFSSCSSDTISTDKPIRDGELLVSESKTFALGFFTPGKSTSRYVGIWYYNLPIQTVVWVANRDTPINDTSGILSIDPTGNLVLHHNLSTIPIWATDVSNGVSVSLSWLQHRVDSDIANFVLMLNNTKTVIWESFDHPTDTMLPYLKVGFDRKTNQSWFLQSWKTDEDPGKGAFTFKFSTIGKPQVFMYNRNLPWWRGGPWNGELFAGVPNMKRDMVTFNVSYVEDDNYSALSFNMFDKSVITRIVIQQSGFFQAFTWDSQKSQWSRYWSVPTDQCDNYGTCGSNSNCDPLNFDDFKCTCLLGFEPKFPRDWYESRDGSGGCVRNKNASVCRNGEGFVKVVSLKVPDTSVAVVKGGLSLEECEKECLRNCSCAAYAPADVRNGGSGCLAWYGDLMDIQKLSDQGQDLFLRVDKVELANYYKKSKGVFDKKRMAAILVASTVAIVLLFSYMYCMWNKRRKDKMMQQLNQDSSGEENGAQSNTHPNLPFFSFRTITAATRNFSNENKLGQGGFGSVYKGCLVNGQEIAVKRLSKDSGQGKREFKNEVTLLVKLQHRNLVKLLGCCFEKKERMLVYEYLPNKSLDFFIFDQNQRSSLGWGKRFELICGIARGVLYLHQDSRLKIIHRDLKAGNVLLDAAMNPKISDFGMARIFGEDEIQARTKRVVGTYGYMAPEYAMEGRYSTKSDVFSYGVLLLEIIAGQRNTHCEIGRTSPNLIGHVWTLWTEGKALDIVDLALNQSYPPDIVLKCIQIGLLCVQENAMNRPPMLEVVLMLANETPLSPPQKPAFLLIGNQVLQESSTSGGSSSINELTETTISAR* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2466 849 Pfam S-locus glycoprotein domain 229 341 IPR000858 GO:0048544
Psa7g2466 849 ProSiteProfiles Bulb-type lectin domain profile. 41 168 IPR001480 -
Psa7g2466 849 Pfam D-mannose binding lectin 89 197 IPR001480 -
Psa7g2466 849 PANTHER - 27 846 - -
Psa7g2466 849 CDD B_lectin 47 171 IPR001480 -
Psa7g2466 849 Gene3D Phosphorylase Kinase; domain 1 507 608 - -
Psa7g2466 849 CDD STKc_IRAK 539 804 - -
Psa7g2466 849 ProSitePatterns Protein kinases ATP-binding region signature. 539 561 IPR017441 GO:0005524
Psa7g2466 849 Gene3D - 34 170 IPR036426 -
Psa7g2466 849 SMART serkin_6 533 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2466 849 Pfam Protein tyrosine and serine/threonine kinase 535 801 IPR001245 GO:0004672|GO:0006468
Psa7g2466 849 ProSiteProfiles PAN/Apple domain profile. 364 445 IPR003609 -
Psa7g2466 849 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 27 846 - -
Psa7g2466 849 Gene3D Transferase(Phosphotransferase) domain 1 609 811 - -
Psa7g2466 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Psa7g2466 849 SMART ntp_6 365 444 IPR003609 -
Psa7g2466 849 ProSiteProfiles Protein kinase domain profile. 533 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2466 849 CDD PAN_AP_plant 365 444 - -
Psa7g2466 849 SUPERFAMILY Protein kinase-like (PK-like) 514 813 IPR011009 -
Psa7g2466 849 PIRSF SRK 14 849 IPR024171 GO:0004674
Psa7g2466 849 Gene3D Hepatocyte Growth Factor 361 442 - -
Psa7g2466 849 ProSiteProfiles EGF-like domain profile. 305 343 IPR000742 -
Psa7g2466 849 Pfam PAN-like domain 364 430 IPR003609 -
Psa7g2466 849 SMART blect_4 47 171 IPR001480 -
Psa7g2466 849 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 202 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2466 Psa-Chr7 174201069 174204901 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2466 521 849 Receptor kinase-like Gene Family AT4G11530 54.006 6.40e-120 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa7g2466 PK_Tyr_Ser-Thr 7.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2466 - - mtr:MTR_4g091840 1383.24