Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2465 ATGGATTATGCAAAAAATCTTCTCTACCTTGTCATAACCCAGAATCATACATATAATAATTTGCAGCTAAACTGTTTGATTATATTCCTTTTCATATTCTCTTTTTGCTCTTGTTCTACTGATACCATATCTATTCACAAACCTATAACAGATGGTGGTCACCTCCTCGTTTCTAAATCTAAAACATTTGCACTTGGATTCTTCACTCCCGGAAAATCCACTTCTCGCTATGTTGGAATTTGGTACTACAATTTGCCAATCCAAACTGTTGTTTGGGTTGCAAACAGAGATACTCCAATCAATGACACTTCTGGAATTCTATCAATCCACTCGAGTGGAAATCTAGTACTCCACCATAACCTTAGCACCATTCCCATTTGGTCTACCAATGTTTCATTACCACATTCCCTAACAAATAACAACTCTATTGTTATAGCTCAACTATCAGATTTAGCAAACCTTGCTCTGATGCTAAATAACACCAAAACTGTCATCTGGGAAAGCTTTGATCATCCAACAGACACCTGGCTTCCATATCTAAGGCTTGGTTTTGATAGAAAAACTAACCGAAACCGGTTCCTTCAATCCTGGAAGACAGATGCTGATCCGGGAAAAGGTGCATTCACAGTGAACTTCAGCACCATTGGTAAACCTCAGTTGTTTATGTACAACCATGATCGTTCTTGGTGGCGTGGGGGACATTGGAACGGAGAATTAATTGTAGGTCAACCTTACATGAAACGAGATATGCCCTTTTGTAACATTTCTTTGGTTGAAGATGACAACTATGTAGCACTCACCTATAACATGTTTGACACGTCTGTCATTCTTAGGATAGTGCTTCTGCAATCTGGGTTCTTTAGAGCATTCACGTGGGACAGTCAAGAGAGCCAATGGAACCAGTACTGGTCTGAACCAACAAACCAATGTGATGACTATGGAACTTGTGGATCAAACAGTAATTGTGATCCTTTGAACTTAGAGAGCTTTAAGTGTTCTTGTTTACCAGGTTTTGAACCCAAATTTCCACATGATTGGTATGATAGTAGAGTCGGGTCAGGAGGATGTGTAAGGAACAAAGGGGTATCTGTTTGTGGAAATGGAGAAGGGTTTGTCAAAGCTGTAAACTTGAAAGTTCCAGATACATCTGTGGCAGTTGCTAAAGGTGGTTTAAGTTTGGAAGAATGTGAGAAAGAATGTTTCAGAAACTGCTCTTGTACTGCCTATGCAGCTGTTGATGTGAGAAATGGTGGAAATGGGTGTTTGGCATGGTACGGGGATTTAATGGACATTCAGAAACTTGGTAATCAAGGCCAGGATTTGTTTTTACGCGTCGATAAAGTTGAACTTGCCAATTACTACAAAAAAAGCAAAGGAGCCCTTGATAAAAAGATAATGGCTACAATTCTTGTAGCTTCTATTGTTGCAACTGTTCTCCTCTCCTGTGTATGCGTGTATTGCCGGCGGAAGAAAAAAAGAAAGGATAAAATGATGCGGCAATTAAACCAAGATTCCTCTGGAGAAGAGAATGGCGCACAAATAACCACACATCCGAATCTACCATTTTTCAATTTTAAAACGATAATGACAGCTACAAGAAATTGTGGTCATGAGAATAAGCTGGGACAAGGTGGATTTGGCTCTGTGTATAAGGGTTGCTTGGTTAATGGACAAGAGATAGCTGTGAAAAGATTATCCAAATATTCAGGTCAAGGCAAAGGAGAGTTTAAAAACGAAGTTACACTTTTAGTTAAACTCCAACACAGAAATCTAGTGAGATTGCTCGGCTGTTGCTTTGAAAAAGAAGAAAGGATGCTAGTTTACGAATACCTACCAAACAAAAGCCTAGACTTCTTCATATTCGATCTAAACCAAAGGTCGTCATTGGATTGGGATAAGCGTTTTGAAATTATTTGTGGGATTGCTCGAGGTTTGTTATATCTTCATCAAGATTCAAGACTGAAAATAATTCATAGAGATCTGAAAGCCAGCAACGTTCTCCTTGATGTTGCAATGAATCCCAAAATATCAGATTTTGGTATGGCTAGAATATTTGGAGAAGATGAAATCCAAGCAAGAACAAGAAGAGTTGTCGGAACATATGGATATATGGCACCTGAATATGCAATGGAAGGACTATATTCAACAAAATCTGATGTCTTCAGTTACGGGGTCTTGCTACTAGAAATTATTGCTGGCCAAAGAAACTCCCATTATGAAAAAGAAAGATCCTCCCTAAATTTAATCGGACATGTGTGGACACTATGGACAGAGGGAAGAGCCTTGGATATAGTTGATCCAGCACTAAACCAGTTTTGTCCCTCTGCTATAGCTCTAAGATGCATTAAAATTGGACTCTTGTGTGTGCAAGAAAATGCCATGAATAGACCATCAATGTCAGAAGTGGTTTTCATGCTATGCAATGAAACACCTCTTTACCCACCTCAAAAACCAGCATTTTTATTCAAGGGCAACCAAGATTTTCAGGAGTCTTCAACATCAGGAGGATGTTCCTCGATAAATGAATTAACAGAAACTATCATCAGTGCTCGTTAA 2556 0.3897 MDYAKNLLYLVITQNHTYNNLQLNCLIIFLFIFSFCSCSTDTISIHKPITDGGHLLVSKSKTFALGFFTPGKSTSRYVGIWYYNLPIQTVVWVANRDTPINDTSGILSIHSSGNLVLHHNLSTIPIWSTNVSLPHSLTNNNSIVIAQLSDLANLALMLNNTKTVIWESFDHPTDTWLPYLRLGFDRKTNRNRFLQSWKTDADPGKGAFTVNFSTIGKPQLFMYNHDRSWWRGGHWNGELIVGQPYMKRDMPFCNISLVEDDNYVALTYNMFDTSVILRIVLLQSGFFRAFTWDSQESQWNQYWSEPTNQCDDYGTCGSNSNCDPLNLESFKCSCLPGFEPKFPHDWYDSRVGSGGCVRNKGVSVCGNGEGFVKAVNLKVPDTSVAVAKGGLSLEECEKECFRNCSCTAYAAVDVRNGGNGCLAWYGDLMDIQKLGNQGQDLFLRVDKVELANYYKKSKGALDKKIMATILVASIVATVLLSCVCVYCRRKKKRKDKMMRQLNQDSSGEENGAQITTHPNLPFFNFKTIMTATRNCGHENKLGQGGFGSVYKGCLVNGQEIAVKRLSKYSGQGKGEFKNEVTLLVKLQHRNLVRLLGCCFEKEERMLVYEYLPNKSLDFFIFDLNQRSSLDWDKRFEIICGIARGLLYLHQDSRLKIIHRDLKASNVLLDVAMNPKISDFGMARIFGEDEIQARTRRVVGTYGYMAPEYAMEGLYSTKSDVFSYGVLLLEIIAGQRNSHYEKERSSLNLIGHVWTLWTEGRALDIVDPALNQFCPSAIALRCIKIGLLCVQENAMNRPSMSEVVFMLCNETPLYPPQKPAFLFKGNQDFQESSTSGGCSSINELTETIISAR* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2465 851 Gene3D Phosphorylase Kinase; domain 1 494 610 - -
Psa7g2465 851 SUPERFAMILY Protein kinase-like (PK-like) 519 818 IPR011009 -
Psa7g2465 851 SMART serkin_6 538 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2465 851 SMART ntp_6 366 445 IPR003609 -
Psa7g2465 851 Pfam S-locus glycoprotein domain 230 342 IPR000858 GO:0048544
Psa7g2465 851 Gene3D - 34 169 IPR036426 -
Psa7g2465 851 PANTHER - 25 846 - -
Psa7g2465 851 CDD B_lectin 48 172 IPR001480 -
Psa7g2465 851 PIRSF SRK 12 851 IPR024171 GO:0004674
Psa7g2465 851 SMART blect_4 46 172 IPR001480 -
Psa7g2465 851 ProSiteProfiles Bulb-type lectin domain profile. 40 169 IPR001480 -
Psa7g2465 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Psa7g2465 851 ProSiteProfiles Protein kinase domain profile. 535 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g2465 851 CDD PAN_AP_plant 366 445 - -
Psa7g2465 851 CDD STKc_IRAK 541 808 - -
Psa7g2465 851 ProSitePatterns Protein kinases ATP-binding region signature. 541 563 IPR017441 GO:0005524
Psa7g2465 851 ProSiteProfiles PAN/Apple domain profile. 365 446 IPR003609 -
Psa7g2465 851 Gene3D Hepatocyte Growth Factor 363 443 - -
Psa7g2465 851 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 203 IPR036426 -
Psa7g2465 851 ProSiteProfiles EGF-like domain profile. 306 344 IPR000742 -
Psa7g2465 851 Pfam Protein tyrosine and serine/threonine kinase 538 804 IPR001245 GO:0004672|GO:0006468
Psa7g2465 851 Gene3D Transferase(Phosphotransferase) domain 1 611 811 - -
Psa7g2465 851 Pfam PAN-like domain 365 431 IPR003609 -
Psa7g2465 851 Pfam D-mannose binding lectin 89 198 IPR001480 -
Psa7g2465 851 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 25 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2465 Psa-Chr7 174139253 174143484 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2465 487 851 Receptor kinase-like Gene Family AT4G11530 52.547 1.69e-122 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa7g2465 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2465 - - mtr:MTR_4g091840 1343.95